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RHA3B RING-H2 finger A3B [ Arabidopsis thaliana (thale cress) ]

Gene ID: 829700, updated on 18-Sep-2024

Summary

Official Symbol
RHA3B
Official Full Name
RING-H2 finger A3B
Primary source
TAIR:AT4G35480
Locus tag
AT4G35480
See related
Araport:AT4G35480
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F15J1.50; F15J1_50; RING-H2 finger A3B; RING-H2 FINGER PROTEIN RHA3B
Summary
Encodes a putative RING-H2 finger protein RHA3b.
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Genomic context

See RHA3B in Genome Data Viewer
Location:
chromosome: 4
Exon count:
1
Sequence:
Chromosome: 4; NC_003075.7 (16851972..16853035, complement)

Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene NADPH-dependent thioredoxin reductase B Neighboring gene plant intracellular ras group-related LRR 4 Neighboring gene uncharacterized protein Neighboring gene ncRNA Neighboring gene mitochondrial ribosomal protein L11

General gene information

NM_119713.4

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
Process Evidence Code Pubs
acts_upstream_of_or_within protein ubiquitination IGI
Inferred from Genetic Interaction
more info
PubMed 
Component Evidence Code Pubs
located_in nucleus ISM
Inferred from Sequence Model
more info
 

General protein information

Preferred Names
RING-H2 finger A3B
NP_195273.1
  • RING-H2 finger A3B (RHA3B); FUNCTIONS IN: zinc ion binding; INVOLVED IN: response to chitin; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING-H2 finger A3A (TAIR:AT2G17450.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003075.7 Reference assembly

    Range
    16851972..16853035 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_119713.4NP_195273.1  RING-H2 finger A3B [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_195273.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q4TU10, Q9ZT49
    UniProtKB/TrEMBL
    A0A178UXS9, A0A5S9XZA5
    Conserved Domains (1) summary
    cd16454
    Location:112155
    RING-H2_PA-TM-RING; RING finger, H2 subclass, found in the PA-TM-RING ubiquitin ligase family