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ADF9 actin depolymerizing factor 9 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 829649, updated on 18-Sep-2024

Summary

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Official Symbol
ADF9
Official Full Name
actin depolymerizing factor 9
Primary source
TAIR:AT4G34970
Locus tag
AT4G34970
See related
Araport:AT4G34970
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
actin depolymerizing factor 9; M4E13.30; M4E13_30
Summary
A member of actin polymerizing factors (ADFs)family, ADF9 primarily functions as an actin bundling protein.
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Genomic context

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See ADF9 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
3
Sequence:
Chromosome: 4; NC_003075.7 (16653704..16654955)

Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene Major facilitator superfamily protein Neighboring gene Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein Neighboring gene tRNA-Thr Neighboring gene subtilisin-like serine protease 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003075.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. ACTIN DEPOLYMERIZING FACTOR9 controls development and gene expression in Arabidopsis. Burgos-Rivera B, et al. Plant Mol Biol, 2008 Dec. PMID 18830798, Free PMC Article
  2. Arabidopsis actin-depolymerizing factors (ADFs) 1 and 9 display antagonist activities. Tholl S, et al. FEBS Lett, 2011 Jun 23. PMID 21570971
  3. Plant Actin-Depolymerizing Factors Possess Opposing Biochemical Properties Arising from Key Amino Acid Changes throughout Evolution. Nan Q, et al. Plant Cell, 2017 Feb. PMID 28123105, Free PMC Article
  4. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

GeneRIFs: Gene References Into Functions

General gene information

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Homology

NM_119663.4

Gene Ontology Provided by TAIR

Process Evidence Code Pubs
acts_upstream_of_or_within actin filament bundle assembly IDA
Inferred from Direct Assay
more info
 PubMed 
involved_in actin filament depolymerization IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within actin filament polymerization IDA
Inferred from Direct Assay
more info
 PubMed 
Component Evidence Code Pubs
located_in actin cytoskeleton IEA
Inferred from Electronic Annotation
more info
  
located_in cytoplasm ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
actin depolymerizing factor 9
NP_195223.2
  • actin depolymerizing factor 9 (ADF9); FUNCTIONS IN: actin binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Actin-binding, cofilin/tropomyosin type (InterPro:IPR002108); BEST Arabidopsis thaliana protein match is: actin depolymerizing factor 5 (TAIR:AT2G16700.1); Has 1376 Blast hits to 1375 proteins in 262 species: Archae - 0; Bacteria - 3; Metazoa - 546; Fungi - 141; Plants - 513; Viruses - 0; Other Eukaryotes - 173 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003075.7 Reference assembly

    Range
    16653704..16654955
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_119663.4 → NP_195223.2  actin depolymerizing factor 9 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_195223.2

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    O49606
    UniProtKB/TrEMBL
    A0A178V0D2, A0A5S9XZK2
    Conserved Domains (1) summary
    cl15697
    Location:1 → 141
    ADF_gelsolin; Actin depolymerization factor/cofilin- and gelsolin-like domains
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
O49606.2

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