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EKC/KEOPS complex subunit tprkb-like protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 829592, updated on 18-Sep-2024

Summary

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Official Full Name
EKC/KEOPS complex subunit tprkb-like protein
Primary source
TAIR:AT4G34412
Locus tag
AT4G34412
See related
Araport:AT4G34412
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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Genomic context

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Location:
chromosome: 4
Exon count:
6
Sequence:
Chromosome: 4; NC_003075.7 (16452960..16454633, complement)

Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene miscRNA Neighboring gene ncRNA Neighboring gene redox responsive transcription factor 1 Neighboring gene tRNA-Arg Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003075.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

GeneRIFs: Gene References Into Functions

General gene information

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Homology

NM_148397.2

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in nucleus ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
EKC/KEOPS complex subunit tprkb-like protein
NP_680763.2
  • CONTAINS InterPro DOMAIN/s: Kinase binding protein CGI-121 (InterPro:IPR013926); Has 275 Blast hits to 275 proteins in 139 species: Archae - 0; Bacteria - 5; Metazoa - 98; Fungi - 109; Plants - 42; Viruses - 0; Other Eukaryotes - 21 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003075.7 Reference assembly

    Range
    16452960..16454633 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_148397.2 → NP_680763.2  EKC/KEOPS complex subunit tprkb-like protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_680763.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178USC1, Q6NMZ4
    Conserved Domains (1) summary
    pfam08617
    Location:17 → 169
    CGI-121; Kinase binding protein CGI-121
Nucleotide Protein
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