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Cupredoxin superfamily protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 829580, updated on 18-Sep-2024

Summary

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Official Full Name
Cupredoxin superfamily protein
Primary source
TAIR:AT4G34300
Locus tag
AT4G34300
See related
Araport:AT4G34300
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F10M10.70; F10M10_70
Summary
Encodes protein with 14.7% glycine residues, similar to auxin response factor 30 (GI:20145855) {Arabidopsis thaliana}
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Genomic context

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Location:
chromosome: 4
Exon count:
1
Sequence:
Chromosome: 4; NC_003075.7 (16412773..16413715)

Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene transducin family protein / WD-40 repeat family protein Neighboring gene SWIB/MDM2 domain superfamily protein Neighboring gene alpha/beta-Hydrolases superfamily protein Neighboring gene ncRNA Neighboring gene transmembrane protein, putative (DUF677)

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003075.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables electron transfer activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in nucleus ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
Cupredoxin superfamily protein
NP_195156.1
  • Cupredoxin superfamily protein; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Cupredoxin (InterPro:IPR008972); BEST Arabidopsis thaliana protein match is: Cupredoxin superfamily protein (TAIR:AT4G33930.1); Has 49255 Blast hits to 16966 proteins in 1384 species: Archae - 116; Bacteria - 15915; Metazoa - 13419; Fungi - 4059; Plants - 2660; Viruses - 359; Other Eukaryotes - 12727 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003075.7 Reference assembly

    Range
    16412773..16413715
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_119595.2 → NP_195156.1  Cupredoxin superfamily protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_195156.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q9SYZ5
    Conserved Domains (1) summary
    cl19115
    Location:198 → 304
    Cupredoxin; Cupredoxin superfamily
Nucleotide Protein
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