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CCoAOMT1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 829551, updated on 18-Sep-2024

Summary

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Official Symbol
CCoAOMT1
Official Full Name
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Primary source
TAIR:AT4G34050
Locus tag
AT4G34050
See related
Araport:AT4G34050
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
caffeoyl coenzyme A O-methyltransferase 1; F28A23.190; F28A23_190
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Genomic context

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See CCoAOMT1 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
4
Sequence:
Chromosome: 4; NC_003075.7 (16310409..16312308)

Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene tRNA-Arg Neighboring gene RING/U-box superfamily protein Neighboring gene demeter-like protein 3 Neighboring gene ncRNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003075.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Combining loss of function of FOLYLPOLYGLUTAMATE SYNTHETASE1 and CAFFEOYL-COA 3-O-METHYLTRANSFERASE1 for lignin reduction and improved saccharification efficiency in Arabidopsis thaliana. Xie H, et al. Biotechnol Biofuels, 2019. PMID 31073332, Free PMC Article
  2. A single amino acid determines position specificity of an Arabidopsis thaliana CCoAOMT-like O-methyltransferase. Wils CR, et al. FEBS Lett, 2013 Mar 18. PMID 23416302
  3. The role of CCoAOMT1 and COMT1 in Arabidopsis anthers. Fellenberg C, et al. Planta, 2012 Jul. PMID 22258746
  4. Scopoletin is biosynthesized via ortho-hydroxylation of feruloyl CoA by a 2-oxoglutarate-dependent dioxygenase in Arabidopsis thaliana. Kai K, et al. Plant J, 2008 Sep. PMID 18547395
  5. CCOAOMT1, a candidate cargo secreted via VAMP721/722 secretory vesicles in Arabidopsis. Kwon H, et al. Biochem Biophys Res Commun, 2020 Apr 16. PMID 32059845

See all (13) citations in PubMed

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. CCOAOMT1, a candidate cargo secreted via VAMP721/722 secretory vesicles in Arabidopsis.
    Title: CCOAOMT1, a candidate cargo secreted via VAMP721/722 secretory vesicles in Arabidopsis.
  2. CCoAOMT1 besides its role in vascular tissues can be localized to the tapetum of young stamens, contributing to the biosynthesis of spermidine phenylpropanoid conjugates in Arabidopsis. [CCoAOMT1]
    Title: The role of CCoAOMT1 and COMT1 in Arabidopsis anthers.
  3. A single amino acid determines position specificity of an Arabidopsis thaliana CCoAOMT-like O-methyltransferase.
    Title: A single amino acid determines position specificity of an Arabidopsis thaliana CCoAOMT-like O-methyltransferase.
Submit: New GeneRIF Correction

Pathways from PubChem

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Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

NM_119566.5
NM_179160.1

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables O-methyltransferase activity IEA
Inferred from Electronic Annotation
more info
  
enables caffeoyl-CoA O-methyltransferase activity IDA
Inferred from Direct Assay
more info
 PubMed 
Process Evidence Code Pubs
acts_upstream_of_or_within coumarin biosynthetic process IMP
Inferred from Mutant Phenotype
more info
 PubMed 
acts_upstream_of_or_within lignin biosynthetic process IMP
Inferred from Mutant Phenotype
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasmic stress granule IDA
Inferred from Direct Assay
more info
 PubMed 
located_in cytosol HDA PubMed 
located_in cytosol TAS
Traceable Author Statement
more info
 PubMed 
located_in nucleus ISM
Inferred from Sequence Model
more info
  
located_in plasma membrane HDA PubMed 

General protein information

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Preferred Names
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
NP_195131.1
  • caffeoyl coenzyme A O-methyltransferase 1 (CCoAOMT1); FUNCTIONS IN: caffeoyl-CoA O-methyltransferase activity; INVOLVED IN: coumarin biosynthetic process, response to cadmium ion; LOCATED IN: cytosol; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: O-methyltransferase, family 3 (InterPro:IPR002935); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT4G26220.1); Has 5458 Blast hits to 5455 proteins in 1478 species: Archae - 33; Bacteria - 3172; Metazoa - 243; Fungi - 122; Plants - 614; Viruses - 0; Other Eukaryotes - 1274 (source: NCBI BLink).
NP_849491.1
  • caffeoyl coenzyme A O-methyltransferase 1 (CCoAOMT1); FUNCTIONS IN: caffeoyl-CoA O-methyltransferase activity; INVOLVED IN: coumarin biosynthetic process, response to cadmium ion; LOCATED IN: cytosol; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: O-methyltransferase, family 3 (InterPro:IPR002935); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT4G26220.1); Has 3628 Blast hits to 3614 proteins in 1109 species: Archae - 11; Bacteria - 2045; Metazoa - 117; Fungi - 47; Plants - 463; Viruses - 0; Other Eukaryotes - 945 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003075.7 Reference assembly

    Range
    16310409..16312308
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001342249.1 → NP_001328048.1  S-adenosyl-L-methionine-dependent methyltransferases superfamily protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1P8B3H0

  2. NM_119566.5 → NP_195131.1  S-adenosyl-L-methionine-dependent methyltransferases superfamily protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_195131.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    O49499, Q8L989
    UniProtKB/TrEMBL
    A0A178V7A4, A0A5S9XYU5
    Conserved Domains (1) summary
    PLN02589
    Location:15 → 259
    PLN02589; caffeoyl-CoA O-methyltransferase

  3. NM_179160.1 → NP_849491.1  S-adenosyl-L-methionine-dependent methyltransferases superfamily protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_849491.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q3E6Z1
    Conserved Domains (1) summary
    cl17173
    Location:30 → 148
    AdoMet_MTases; S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy). ...
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
O49499.1

Gene LinkOut

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