U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

myb-like protein X [ Arabidopsis thaliana (thale cress) ]

Gene ID: 829516, updated on 18-Sep-2024

Summary

Go to the top of the page Help
Official Full Name
myb-like protein X
Primary source
TAIR:AT4G33740
Locus tag
AT4G33740
See related
Araport:AT4G33740
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
T16L1.230; T16L1_230
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: 4
Exon count:
3
Sequence:
Chromosome: 4; NC_003075.7 (16186791..16189123)

Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein Neighboring gene uncharacterized protein Neighboring gene tRNA synthetase class II (D, K and N) family protein Neighboring gene Inositol 1,3,4-trisphosphate 5/6-kinase family protein

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_003075.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Label-free protein quantification for plant Golgi protein localization and abundance. Nikolovski N, et al. Plant Physiol, 2014 Oct. PMID 25122472, Free PMC Article
  2. Separating Golgi Proteins from Cis to Trans Reveals Underlying Properties of Cisternal Localization. Parsons HT, et al. Plant Cell, 2019 Sep. PMID 31266899, Free PMC Article
  3. Isolation and proteomic characterization of the Arabidopsis Golgi defines functional and novel components involved in plant cell wall biosynthesis. Parsons HT, et al. Plant Physiol, 2012 May. PMID 22430844, Free PMC Article
  4. Putative glycosyltransferases and other plant Golgi apparatus proteins are revealed by LOPIT proteomics. Nikolovski N, et al. Plant Physiol, 2012 Oct. PMID 22923678, Free PMC Article
  5. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help
NM_001160813.1
NM_001342229.1
NM_119532.6
NM_179158.4

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in Golgi apparatus HDA PubMed 
located_in Golgi medial cisterna HDA PubMed 
located_in endosome HDA PubMed 
located_in nucleus ISM
Inferred from Sequence Model
more info
  
located_in trans-Golgi network HDA PubMed 

General protein information

Go to the top of the page Help
Preferred Names
myb-like protein X
NP_001320127.1
  • unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G37820.1); Has 138092 Blast hits to 73110 proteins in 2951 species: Archae - 732; Bacteria - 17903; Metazoa - 48520; Fungi - 16808; Plants - 7078; Viruses - 1044; Other Eukaryotes - 46007 (source: NCBI BLink).
NP_195100.4
  • unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G37820.1); Has 138210 Blast hits to 73191 proteins in 2959 species: Archae - 732; Bacteria - 18006; Metazoa - 48521; Fungi - 16820; Plants - 7078; Viruses - 1046; Other Eukaryotes - 46007 (source: NCBI BLink).
NP_849489.4
  • unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G37820.1); Has 138092 Blast hits to 73110 proteins in 2951 species: Archae - 732; Bacteria - 17903; Metazoa - 48520; Fungi - 16808; Plants - 7078; Viruses - 1044; Other Eukaryotes - 46007 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003075.7 Reference assembly

    Range
    16186791..16189123
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001342230.1 → NP_001329806.1  myb-like protein X [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178V0K3, A0A384KK38, A0A654FV88, Q67YL8

  2. NM_119532.6 → NP_195100.4  myb-like protein X [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_195100.4

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178V0K3, A0A384KK38, A0A654FV88, Q67YL8
    Conserved Domains (1) summary
    pfam05087
    Location:159 → 270
    Rota_VP2; Rotavirus VP2 protein

  3. NM_179158.4 → NP_849489.4  myb-like protein X [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_849489.4

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178V0K3, A0A384KK38, A0A654FV88, Q67YL8
    Conserved Domains (1) summary
    pfam05087
    Location:159 → 270
    Rota_VP2; Rotavirus VP2 protein

  4. NM_001342229.1 → NP_001320127.1  myb-like protein X [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178V0K3, A0A384KK38, A0A654FV88, Q67YL8

  5. NM_001160813.1 → NP_001154285.1  myb-like protein X [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_001154285.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178V0K3, A0A384KK38, A0A654FV88, Q67YL8
    Conserved Domains (1) summary
    pfam05087
    Location:159 → 270
    Rota_VP2; Rotavirus VP2 protein
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Other Literature Sources
Molecular Biology Databases
Research Materials
Tools