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Plant invertase/pectin methylesterase inhibitor superfamily [ Arabidopsis thaliana (thale cress) ]

Gene ID: 829459, updated on 18-Sep-2024

Summary

Official Full Name
Plant invertase/pectin methylesterase inhibitor superfamily
Primary source
TAIR:AT4G33230
Locus tag
AT4G33230
See related
Araport:AT4G33230
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F4I10.160; F4I10_160
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Genomic context

Location:
chromosome: 4
Exon count:
3
Sequence:
Chromosome: 4; NC_003075.7 (16026315..16028879, complement)

Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene myosin Neighboring gene F-box family protein Neighboring gene pectin methylesterase 44 Neighboring gene 1-phosphatidylinositol-3-phosphate 5-kinase FAB1A Neighboring gene ncRNA Neighboring gene eukaryotic translation initiation factor 3K

General gene information

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables enzyme inhibitor activity IEA
Inferred from Electronic Annotation
more info
 
enables pectinesterase activity IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
involved_in cell wall modification IEA
Inferred from Electronic Annotation
more info
 
involved_in pectin catabolic process IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
 

General protein information

Preferred Names
Plant invertase/pectin methylesterase inhibitor superfamily
NP_195049.1
  • Plant invertase/pectin methylesterase inhibitor superfamily; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: sperm cell, sepal, male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis; CONTAINS InterPro DOMAIN/s: Pectinesterase, active site (InterPro:IPR018040), Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectinesterase inhibitor (InterPro:IPR006501), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily (TAIR:AT2G26450.1); Has 2991 Blast hits to 2919 proteins in 346 species: Archae - 6; Bacteria - 631; Metazoa - 8; Fungi - 203; Plants - 2112; Viruses - 0; Other Eukaryotes - 31 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003075.7 Reference assembly

    Range
    16026315..16028879 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_119477.2NP_195049.1  Plant invertase/pectin methylesterase inhibitor superfamily [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_195049.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9SMY6
    UniProtKB/TrEMBL
    A0A178UTV0
    Conserved Domains (3) summary
    PLN02745
    Location:1607
    PLN02745; Putative pectinesterase/pectinesterase inhibitor
    cd15798
    Location:97247
    PMEI-like_3; Uncharacterized subfamily of plant invertase/pectin methylesterase inhibitor domains
    pfam01095
    Location:296593
    Pectinesterase; Pectinesterase