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Avr9/Cf-9 rapidly elicited protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 829422, updated on 18-Sep-2024

Summary

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Official Full Name
Avr9/Cf-9 rapidly elicited protein
Primary source
TAIR:AT4G32860
Locus tag
AT4G32860
See related
Araport:AT4G32860
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
T16I18.70; T16I18_70
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Genomic context

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Location:
chromosome: 4
Exon count:
1
Sequence:
Chromosome: 4; NC_003075.7 (15856474..15857440, complement)

Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene ataurora1 Neighboring gene phosphofructokinase 6 Neighboring gene nuclear poly(a) polymerase Neighboring gene Polyketide cyclase/dehydrase and lipid transport superfamily protein Neighboring gene homeobox-leucine zipper protein ATHB-8

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003075.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

GeneRIFs: Gene References Into Functions

General gene information

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NM_119439.4

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in nucleus ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
Avr9/Cf-9 rapidly elicited protein
NP_195012.2
  • unknown protein; Has 46 Blast hits to 46 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 46; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003075.7 Reference assembly

    Range
    15856474..15857440 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_119439.4 → NP_195012.2  Avr9/Cf-9 rapidly elicited protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_195012.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178V450, A0A654FV29, Q6NNI9, Q9M074
    Conserved Domains (1) summary
    pfam05553
    Location:173 → 192
    DUF761; Cotton fibre expressed protein
Nucleotide Protein
Heading Accession and Version

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