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ENTH/VHS/GAT family protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 829412, updated on 18-Sep-2024

Summary

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Official Full Name
ENTH/VHS/GAT family protein
Primary source
TAIR:AT4G32760
Locus tag
AT4G32760
See related
Araport:AT4G32760
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F4D11.40; F4D11_40
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Genomic context

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Location:
chromosome: 4
Exon count:
10
Sequence:
Chromosome: 4; NC_003075.7 (15799077..15804199)

Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene La protein 1 Neighboring gene Homeodomain-like protein Neighboring gene uncharacterized protein Neighboring gene tRNA-Ser Neighboring gene tocopherol cyclase, chloroplast / vitamin E deficient 1 (VTE1) / sucrose export defective 1 (SXD1)

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003075.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Protein-Protein Interaction Network and Subcellular Localization of the Arabidopsis Thaliana ESCRT Machinery. Richardson LG, et al. Front Plant Sci, 2011. PMID 22639582, Free PMC Article
  2. Interactomics of Qa-SNARE in Arabidopsis thaliana. Fujiwara M, et al. Plant Cell Physiol, 2014 Apr. PMID 24556609
  3. Analysis of the Arabidopsis cytosolic proteome highlights subcellular partitioning of central plant metabolism. Ito J, et al. J Proteome Res, 2011 Apr 1. PMID 21166475
  4. Mapping the signaling network of BIN2 kinase using TurboID-mediated biotin labeling and phosphoproteomics. Kim TW, et al. Plant Cell, 2023 Mar 15. PMID 36660928, Free PMC Article
  5. Global Analysis of Membrane-associated Protein Oligomerization Using Protein Correlation Profiling. McBride Z, et al. Mol Cell Proteomics, 2017 Nov. PMID 28887381, Free PMC Article

See all (6) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

NM_119429.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables phosphatidylinositol binding IEA
Inferred from Electronic Annotation
more info
  
enables protein binding IPI
Inferred from Physical Interaction
more info
 PubMed 
enables ubiquitin binding IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in protein transport to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in cytoplasm IDA
Inferred from Direct Assay
more info
 PubMed 
NOT located_in cytosol RCA
inferred from Reviewed Computational Analysis
more info
 PubMed 
located_in nucleus ISM
Inferred from Sequence Model
more info
  
located_in plasma membrane HDA PubMed 

General protein information

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Preferred Names
ENTH/VHS/GAT family protein
NP_001190892.1
  • ENTH/VHS/GAT family protein; FUNCTIONS IN: protein transporter activity; INVOLVED IN: intracellular protein transport, intra-Golgi vesicle-mediated transport; LOCATED IN: Golgi stack; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: VHS (InterPro:IPR002014), GAT (InterPro:IPR004152), VHS subgroup (InterPro:IPR018205), ENTH/VHS (InterPro:IPR008942); BEST Arabidopsis thaliana protein match is: ENTH/VHS/GAT family protein (TAIR:AT3G08790.1).
NP_195002.2
  • ENTH/VHS/GAT family protein; FUNCTIONS IN: protein transporter activity; INVOLVED IN: intracellular protein transport, intra-Golgi vesicle-mediated transport; LOCATED IN: Golgi stack, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: VHS (InterPro:IPR002014), GAT (InterPro:IPR004152), VHS subgroup (InterPro:IPR018205), ENTH/VHS (InterPro:IPR008942); BEST Arabidopsis thaliana protein match is: ENTH/VHS/GAT family protein (TAIR:AT3G08790.1); Has 20336 Blast hits to 14766 proteins in 697 species: Archae - 4; Bacteria - 772; Metazoa - 8080; Fungi - 4287; Plants - 2535; Viruses - 64; Other Eukaryotes - 4594 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003075.7 Reference assembly

    Range
    15799077..15804199
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001203963.2 → NP_001190892.1  ENTH/VHS/GAT family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_001190892.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178UYR5, A0A7G2F7L4, F4JV51
    Conserved Domains (3) summary
    PRK10263
    Location:352 → 541
    PRK10263; DNA translocase FtsK; Provisional
    cd03561
    Location:2 → 132
    VHS; VHS (Vps27/Hrs/STAM) domain family
    cd14231
    Location:188 → 266
    GAT_GGA-like_plant; canonical GAT domain found in uncharacterized Golgi-localized gamma ear-containing Arf-binding protein (GGA)-like proteins mainly found in plants

  2. NM_001342172.1 → NP_001329786.1  ENTH/VHS/GAT family protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1P8B8V4
    Conserved Domains (3) summary
    PRK07764
    Location:132 → 452
    PRK07764; DNA polymerase III subunits gamma and tau; Validated
    cd03561
    Location:2 → 132
    VHS; VHS (Vps27/Hrs/STAM) domain family
    cd14231
    Location:188 → 266
    GAT_GGA-like_plant; canonical GAT domain found in uncharacterized Golgi-localized gamma ear-containing Arf-binding protein (GGA)-like proteins mainly found in plants

  3. NM_119429.3 → NP_195002.2  ENTH/VHS/GAT family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_195002.2

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    O65525, Q8L860
    UniProtKB/TrEMBL
    A0A178UYI3, A0A5S9XYE2, A0A654FV21
    Conserved Domains (3) summary
    PRK10263
    Location:352 → 540
    PRK10263; DNA translocase FtsK; Provisional
    cd03561
    Location:2 → 132
    VHS; VHS (Vps27/Hrs/STAM) domain family
    cd14231
    Location:188 → 266
    GAT_GGA-like_plant; canonical GAT domain found in uncharacterized Golgi-localized gamma ear-containing Arf-binding protein (GGA)-like proteins mainly found in plants
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q8L860.1

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