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paramyosin-like protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 829391, updated on 18-Sep-2024

Summary

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Official Full Name
paramyosin-like protein
Primary source
TAIR:AT4G32560
Locus tag
AT4G32560
See related
Araport:AT4G32560
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
L23H3.40; L23H3_40
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Genomic context

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Location:
chromosome: 4
Exon count:
11
Sequence:
Chromosome: 4; NC_003075.7 (15713736..15716659)

Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene Flavin-binding monooxygenase family protein Neighboring gene transcriptional corepressor LEUNIG Neighboring gene TIFY domain protein 8 Neighboring gene Thioredoxin superfamily protein Neighboring gene 2Fe-2S ferredoxin-like superfamily protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003075.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. CCDC22 and CCDC93, two potential retriever-interacting proteins, are required for root and root hair growth in Arabidopsis. Lewis CD, et al. Front Plant Sci, 2022. PMID 36618652, Free PMC Article
  2. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

GeneRIFs: Gene References Into Functions

General gene information

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NM_001036694.2
NM_001342157.1
NM_119408.2
NM_202933.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in cytoplasm IDA
Inferred from Direct Assay
more info
 PubMed 
located_in nucleus ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
paramyosin-like protein
NP_001031771.1
  • paramyosin-related; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
NP_567897.1
  • paramyosin-related; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
NP_974662.1
  • paramyosin-related; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003075.7 Reference assembly

    Range
    15713736..15716659
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001036694.2 → NP_001031771.1  paramyosin-like protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_001031771.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178V0X6, C0Z2H2

  2. NM_202933.3 → NP_974662.1  paramyosin-like protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_974662.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178V0X6, A0A654FVA3, Q94CB2
    Conserved Domains (1) summary
    TIGR02168
    Location:20 → 306
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type

  3. NM_119408.2 → NP_567897.1  paramyosin-like protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_567897.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178V0X6, A0A654FVA3, Q94CB2
    Conserved Domains (1) summary
    TIGR02168
    Location:20 → 306
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type

  4. NM_001342157.1 → NP_001328038.1  paramyosin-like protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178V0X6, A0A1P8B3F9
Nucleotide Protein
Heading Accession and Version

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