U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

PANK2 pantothenate kinase 2 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 829351, updated on 18-Sep-2024

Summary

Go to the top of the page Help
Official Symbol
PANK2
Official Full Name
pantothenate kinase 2
Primary source
TAIR:AT4G32180
Locus tag
AT4G32180
See related
Araport:AT4G32180
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
ATPANK2; F10M6.180; F10M6_180; pantothenate kinase 2
Summary
Encodes a protein with pantothenate kinase activity.
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See PANK2 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
22
Sequence:
Chromosome: 4; NC_003075.7 (15537559..15543954, complement)

Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene Phox (PX) domain-containing protein Neighboring gene cytochrome P450, family 96, subfamily A, polypeptide 2 Neighboring gene PNAS-3-like protein Neighboring gene Myosin heavy chain-related protein Neighboring gene DNA-binding HORMA family protein

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_003075.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Plant coenzyme A biosynthesis: characterization of two pantothenate kinases from Arabidopsis. Tilton GB, et al. Plant Mol Biol, 2006 Jul. PMID 16897480
  2. Proteomic profiling of tandem affinity purified 14-3-3 protein complexes in Arabidopsis thaliana. Chang IF, et al. Proteomics, 2009 Jun. PMID 19452453, Free PMC Article
  3. Identification of ubiquitinated proteins in Arabidopsis. Manzano C, et al. Plant Mol Biol, 2008 Sep. PMID 18535787
  4. 14-3-3 proteins fine-tune plant nutrient metabolism. Shin R, et al. FEBS Lett, 2011 Jan 3. PMID 21094157
  5. Advanced proteomic analyses yield a deep catalog of ubiquitylation targets in Arabidopsis. Kim DY, et al. Plant Cell, 2013 May. PMID 23667124, Free PMC Article

See all (6) citations in PubMed

GeneRIFs: Gene References Into Functions

Pathways from PubChem

Go to the top of the page

Interactions

Go to the top of the page Help
Products Interactant Other Gene Complex Source Pubs Description

General gene information

Go to the top of the page Help

Homology

NM_001036691.1
NM_001125620.1
NM_119370.5

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables pantothenate kinase activity IEA
Inferred from Electronic Annotation
more info
  
enables pantothenate kinase activity IGI
Inferred from Genetic Interaction
more info
 PubMed 
enables pantothenate kinase activity ISS
Inferred from Sequence or Structural Similarity
more info
 PubMed 
enables protein binding IPI
Inferred from Physical Interaction
more info
 PubMed 
Process Evidence Code Pubs
involved_in coenzyme A biosynthetic process IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in cytoplasm ISM
Inferred from Sequence Model
more info
  

General protein information

Go to the top of the page Help
Preferred Names
pantothenate kinase 2
NP_001031768.1
  • pantothenate kinase 2 (PANK2); FUNCTIONS IN: protein binding, pantothenate kinase activity; INVOLVED IN: coenzyme A biosynthetic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Fumble (InterPro:IPR011602), Domain of unknown function DUF89 (InterPro:IPR002791), Pantothenate kinase, acetyl-CoA regulated, two-domain type (InterPro:IPR015844), Eukaryotic pantothenate kinase (InterPro:IPR004567); BEST Arabidopsis thaliana protein match is: pantothenate kinase 1 (TAIR:AT1G60440.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
NP_001119092.1
  • pantothenate kinase 2 (PANK2); FUNCTIONS IN: protein binding, pantothenate kinase activity; INVOLVED IN: coenzyme A biosynthetic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Fumble (InterPro:IPR011602), Domain of unknown function DUF89 (InterPro:IPR002791), Pantothenate kinase, acetyl-CoA regulated, two-domain type (InterPro:IPR015844), Eukaryotic pantothenate kinase (InterPro:IPR004567); BEST Arabidopsis thaliana protein match is: pantothenate kinase 1 (TAIR:AT1G60440.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
NP_194945.3
  • pantothenate kinase 2 (PANK2); FUNCTIONS IN: protein binding, pantothenate kinase activity; INVOLVED IN: coenzyme A biosynthetic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Fumble (InterPro:IPR011602), Domain of unknown function DUF89 (InterPro:IPR002791), Pantothenate kinase, acetyl-CoA regulated, two-domain type (InterPro:IPR015844), Eukaryotic pantothenate kinase (InterPro:IPR004567); BEST Arabidopsis thaliana protein match is: pantothenate kinase 1 (TAIR:AT1G60440.1); Has 1440 Blast hits to 1407 proteins in 439 species: Archae - 13; Bacteria - 450; Metazoa - 360; Fungi - 145; Plants - 175; Viruses - 0; Other Eukaryotes - 297 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003075.7 Reference assembly

    Range
    15537559..15543954 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_119370.5 → NP_194945.3  pantothenate kinase 2 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_194945.3

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    O49372, O49374, Q8L5Y9
    UniProtKB/TrEMBL
    A0A178V4D0, A0A5S9XYA6, A0A7G2F2L1
    Conserved Domains (1) summary
    PLN02902
    Location:25 → 901
    PLN02902; pantothenate kinase

  2. NM_001036691.1 → NP_001031768.1  pantothenate kinase 2 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_001031768.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A7G2F2L1, F4JTJ6
    Conserved Domains (3) summary
    PLN02902
    Location:25 → 782
    PLN02902; pantothenate kinase
    cl15397
    Location:572 → 777
    DUF89; Protein of unknown function DUF89
    cl17037
    Location:64 → 462
    NBD_sugar-kinase_HSP70_actin; Nucleotide-Binding Domain of the sugar kinase/HSP70/actin superfamily

  3. NM_001125620.1 → NP_001119092.1  pantothenate kinase 2 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_001119092.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A7G2F2L1, F4JTJ6
    Conserved Domains (3) summary
    PLN02902
    Location:25 → 782
    PLN02902; pantothenate kinase
    cl15397
    Location:572 → 777
    DUF89; Protein of unknown function DUF89
    cl17037
    Location:64 → 462
    NBD_sugar-kinase_HSP70_actin; Nucleotide-Binding Domain of the sugar kinase/HSP70/actin superfamily
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q8L5Y9.2

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Other Literature Sources
Molecular Biology Databases
Research Materials
Tools