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myosin heavy chain-like protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 829261, updated on 18-Sep-2024

Summary

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Official Full Name
myosin heavy chain-like protein
Primary source
TAIR:AT4G31340
Locus tag
AT4G31340
See related
Araport:AT4G31340
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F8F16.160; F8F16_160
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Genomic context

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Location:
chromosome: 4
Exon count:
15
Sequence:
Chromosome: 4; NC_003075.7 (15205437..15209604)

Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene transmembrane protein, putative (Protein of unknown function, DUF599) Neighboring gene ncRNA Neighboring gene ncRNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003075.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Interactomics of Qa-SNARE in Arabidopsis thaliana. Fujiwara M, et al. Plant Cell Physiol, 2014 Apr. PMID 24556609
  2. Mapping the Arabidopsis organelle proteome. Dunkley TP, et al. Proc Natl Acad Sci U S A, 2006 Apr 25. PMID 16618929, Free PMC Article
  3. A proteomics dissection of Arabidopsis thaliana vacuoles isolated from cell culture. Jaquinod M, et al. Mol Cell Proteomics, 2007 Mar. PMID 17151019, Free PMC Article
  4. Isolation and proteomic characterization of the Arabidopsis Golgi defines functional and novel components involved in plant cell wall biosynthesis. Parsons HT, et al. Plant Physiol, 2012 May. PMID 22430844, Free PMC Article
  5. Discovering the RNA-Binding Proteome of Plant Leaves with an Improved RNA Interactome Capture Method. Bach-Pages M, et al. Biomolecules, 2020 Apr 24. PMID 32344669, Free PMC Article

See all (10) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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NM_001036683.1
NM_119283.4

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables mRNA binding IDA
Inferred from Direct Assay
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus HDA PubMed 
located_in chloroplast ISM
Inferred from Sequence Model
more info
  
located_in endoplasmic reticulum HDA PubMed 
located_in plant-type vacuole HDA PubMed 
located_in plasma membrane HDA PubMed 

General protein information

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Preferred Names
myosin heavy chain-like protein
NP_001031760.1
  • myosin heavy chain-related; LOCATED IN: endoplasmic reticulum, plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: DNA repair ATPase-related (TAIR:AT2G24420.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
NP_567873.1
  • myosin heavy chain-related; LOCATED IN: endoplasmic reticulum, plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: DNA repair ATPase-related (TAIR:AT2G24420.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003075.7 Reference assembly

    Range
    15205437..15209604
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_119283.4 → NP_567873.1  myosin heavy chain-like protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_567873.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178UTG5, A0A5S9XXK4, A0A7G2F590, Q8GUN1
    Conserved Domains (2) summary
    PRK12435
    Location:249 → 328
    PRK12435; ferrochelatase; Provisional
    TIGR02168
    Location:42 → 202
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type

  2. NM_001036683.1 → NP_001031760.1  myosin heavy chain-like protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_001031760.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    F4JRY9, O49583
    Conserved Domains (4) summary
    cl17044
    Location:56 → 91
    DD_cGKI; Dimerization/Docking domain of Cyclic GMP-dependent Protein Kinase I
    cd00187
    Location:106 → 189
    TOP4c; DNA Topoisomerase, subtype IIA; domain A'; bacterial DNA topoisomerase IV (C subunit, ParC), bacterial DNA gyrases (A subunit, GyrA),mammalian DNA toposiomerases II. DNA topoisomerases are essential enzymes that regulate the conformational changes in DNA ...
    pfam01442
    Location:43 → 190
    Apolipoprotein; Apolipoprotein A1/A4/E domain
    pfam12329
    Location:75 → 146
    TMF_DNA_bd; TATA element modulatory factor 1 DNA binding
Nucleotide Protein
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