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QWRF8 QWRF motif protein (DUF566) [ Arabidopsis thaliana (thale cress) ]

Gene ID: 829194, updated on 18-Sep-2024

Summary

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Official Symbol
QWRF8
Official Full Name
QWRF motif protein (DUF566)
Primary source
TAIR:AT4G30710
Locus tag
AT4G30710
See related
Araport:AT4G30710
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
AUG8; augmin subunit 8; QWRF domain containing 8; T10C21.60; T10C21_60
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Genomic context

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See QWRF8 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
8
Sequence:
Chromosome: 4; NC_003075.7 (14965143..14969763, complement)

Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene Translation initiation factor 3 protein Neighboring gene Pentatricopeptide repeat (PPR) superfamily protein Neighboring gene FAD/NAD(P)-binding oxidoreductase family protein Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003075.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The Mitotic Function of Augmin Is Dependent on Its Microtubule-Associated Protein Subunit EDE1 in Arabidopsis thaliana. Lee YJ, et al. Curr Biol, 2017 Dec 18. PMID 29225022
  2. Characterization of the Arabidopsis augmin complex uncovers its critical function in the assembly of the acentrosomal spindle and phragmoplast microtubule arrays. Hotta T, et al. Plant Cell, 2012 Apr. PMID 22505726, Free PMC Article
  3. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

GeneRIFs: Gene References Into Functions

General gene information

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Homology

NM_001342017.1
NM_001342018.1
NM_119217.3
NM_202913.1

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables protein binding IPI
Inferred from Physical Interaction
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
QWRF motif protein (DUF566)
NP_194800.1
  • Family of unknown function (DUF566); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF566 (InterPro:IPR007573); BEST Arabidopsis thaliana protein match is: Family of unknown function (DUF566) (TAIR:AT2G24070.2); Has 9171 Blast hits to 3934 proteins in 412 species: Archae - 0; Bacteria - 1377; Metazoa - 2513; Fungi - 1393; Plants - 533; Viruses - 49; Other Eukaryotes - 3306 (source: NCBI BLink).
NP_974642.1
  • Family of unknown function (DUF566); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF566 (InterPro:IPR007573); BEST Arabidopsis thaliana protein match is: Family of unknown function (DUF566) (TAIR:AT2G24070.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003075.7 Reference assembly

    Range
    14965143..14969763 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_119217.3 → NP_194800.1  QWRF motif protein (DUF566) [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_194800.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    F4JQE1, Q9SUH5
    UniProtKB/TrEMBL
    A0A5S9XY92, A0A654FUC7
    Conserved Domains (2) summary
    PHA03307
    Location:127 → 391
    PHA03307; transcriptional regulator ICP4; Provisional
    pfam04484
    Location:305 → 593
    QWRF; QWRF family

  2. NM_001342017.1 → NP_001329921.1  QWRF motif protein (DUF566) [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    F4JQE1, Q9SUH5
    UniProtKB/TrEMBL
    A0A5S9XY92, A0A654FUC7
    Conserved Domains (2) summary
    PHA03307
    Location:127 → 391
    PHA03307; transcriptional regulator ICP4; Provisional
    pfam04484
    Location:305 → 593
    QWRF; QWRF family

  3. NM_001342018.1 → NP_001329922.1  QWRF motif protein (DUF566) [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178V0V1, A0A1P8B957
    Conserved Domains (2) summary
    PHA03307
    Location:127 → 391
    PHA03307; transcriptional regulator ICP4; Provisional
    pfam04484
    Location:305 → 593
    QWRF; QWRF family

  4. NM_202913.1 → NP_974642.1  QWRF motif protein (DUF566) [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_974642.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A654FUC7
    Conserved Domains (1) summary
    pfam04484
    Location:287 → 593
    DUF566; Family of unknown function (DUF566)
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9SUH5.1

Gene LinkOut

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