U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Glucose-1-phosphate adenylyltransferase family protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 829180, updated on 18-Sep-2024

Summary

Go to the top of the page Help
Official Full Name
Glucose-1-phosphate adenylyltransferase family protein
Primary source
TAIR:AT4G30570
Locus tag
AT4G30570
See related
Araport:AT4G30570
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F17I23.90; F17I23_90
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: 4
Exon count:
4
Sequence:
Chromosome: 4; NC_003075.7 (14930599..14932021, complement)

Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene Class I glutamine amidotransferase-like superfamily protein Neighboring gene Class I glutamine amidotransferase-like superfamily protein Neighboring gene cyclic nucleotide gated channel 9 Neighboring gene Phospholipid/glycerol acyltransferase family protein Neighboring gene early nodulin-like protein 12

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_003075.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. GDP-mannose pyrophosphorylase is a genetic determinant of ammonium sensitivity in Arabidopsis thaliana. Qin C, et al. Proc Natl Acad Sci U S A, 2008 Nov 25. PMID 19011088, Free PMC Article
  2. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. NH(4)(+) inhibits GMPase activity and that the level of GMPase activity regulates Arabidopsis sensitivity to NH(4)(+)
    Title: GDP-mannose pyrophosphorylase is a genetic determinant of ammonium sensitivity in Arabidopsis thaliana.
Submit: New GeneRIF Correction

General gene information

Go to the top of the page Help
NM_119203.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables mannose-1-phosphate guanylyltransferase (GTP) activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in GDP-mannose biosynthetic process IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in cytoplasm ISM
Inferred from Sequence Model
more info
  

General protein information

Go to the top of the page Help
Preferred Names
Glucose-1-phosphate adenylyltransferase family protein
NP_194786.1
  • Glucose-1-phosphate adenylyltransferase family protein; FUNCTIONS IN: transferase activity, nucleotidyltransferase activity; INVOLVED IN: biosynthetic process; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Trimeric LpxA-like (InterPro:IPR011004), Nucleotidyl transferase (InterPro:IPR005835); BEST Arabidopsis thaliana protein match is: Glucose-1-phosphate adenylyltransferase family protein (TAIR:AT2G39770.2); Has 20365 Blast hits to 20356 proteins in 2848 species: Archae - 923; Bacteria - 14729; Metazoa - 391; Fungi - 293; Plants - 329; Viruses - 0; Other Eukaryotes - 3700 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003075.7 Reference assembly

    Range
    14930599..14932021 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_119203.3 → NP_194786.1  Glucose-1-phosphate adenylyltransferase family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_194786.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q8H1Q7, Q9M0A3
    UniProtKB/TrEMBL
    A0A178USH1, A0A5S9XXE0
    Conserved Domains (2) summary
    cd06425
    Location:1 → 215
    M1P_guanylylT_B_like_N; N-terminal domain of the M1P-guanylyltransferase B-isoform like proteins
    cl00160
    Location:237 → 316
    LbetaH; Left-handed parallel beta-Helix (LbetaH or LbH) domain: The alignment contains 5 turns, each containing three imperfect tandem repeats of a hexapeptide repeat motif (X-[STAV]-X-[LIV]-[GAED]-X). Proteins containing hexapeptide repeats are often enzymes ...
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q8H1Q7.1

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.