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ABCE3 non-intrinsic ABC protein 15 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 829153, updated on 18-Sep-2024

Summary

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Official Symbol
ABCE3
Official Full Name
non-intrinsic ABC protein 15
Primary source
TAIR:AT4G30300
Locus tag
AT4G30300
See related
Araport:AT4G30300
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
ARABIDOPSIS THALIANA NON-INTRINSIC ABC PROTEIN 15; ATNAP15; ATP-binding cassette E3; F17I23.360; F17I23_360; NAP15; non-intrinsic ABC protein 15
Summary
member of NAP subfamily
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Genomic context

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See ABCE3 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
1
Sequence:
Chromosome: 4; NC_003075.7 (14831005..14831550, complement)

Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene xyloglucan endotransglucosylase/hydrolase 18 Neighboring gene xyloglucan endotransglucosylase/hydrolase 19 Neighboring gene FGGY family of carbohydrate kinase Neighboring gene CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003075.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The Arabidopsis thaliana ABC protein superfamily, a complete inventory. Sánchez-Fernández R, et al. J Biol Chem, 2001 Aug 10. PMID 11346655
  2. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

GeneRIFs: Gene References Into Functions

General gene information

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Homology

NM_119176.1

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables ATP hydrolysis activity IEA
Inferred from Electronic Annotation
more info
  
enables transmembrane transporter activity ISS
Inferred from Sequence or Structural Similarity
more info
 PubMed 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in mitochondrion ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
non-intrinsic ABC protein 15
NP_194759.1
  • non-intrinsic ABC protein 15 (NAP15); CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439); BEST Arabidopsis thaliana protein match is: RNAse l inhibitor protein 2 (TAIR:AT4G19210.1); Has 178874 Blast hits to 170972 proteins in 3466 species: Archae - 4111; Bacteria - 144876; Metazoa - 3882; Fungi - 1523; Plants - 1775; Viruses - 14; Other Eukaryotes - 22693 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003075.7 Reference assembly

    Range
    14831005..14831550 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_119176.1 → NP_194759.1  non-intrinsic ABC protein 15 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_194759.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9M0D0
    UniProtKB/TrEMBL
    A0A178V187, A0A5S9XX85, A0A654FU99
    Conserved Domains (1) summary
    cl38936
    Location:1 → 177
    P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9M0D0.1

Gene LinkOut

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