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CRS1 / YhbY (CRM) domain-containing protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 829097, updated on 18-Sep-2024

Summary

Official Full Name
CRS1 / YhbY (CRM) domain-containing protein
Primary source
TAIR:AT4G29750
Locus tag
AT4G29750
See related
Araport:AT4G29750
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
T16L4.260; T16L4_260
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Genomic context

Location:
chromosome: 4
Exon count:
9
Sequence:
Chromosome: 4; NC_003075.7 (14569665..14573177)

Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene cytokinin oxidase 4 Neighboring gene ncRNA Neighboring gene target of trans acting-siR480/255 protein Neighboring gene target of trans acting-siR480/255 protein

General gene information

NM_001341978.1
NM_119121.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables mRNA binding PubMed 
enables mRNA binding  
Component Evidence Code Pubs
located_in chloroplast  

General protein information

Preferred Names
CRS1 / YhbY (CRM) domain-containing protein
NP_194704.2
  • CRS1 / YhbY (CRM) domain-containing protein; FUNCTIONS IN: RNA binding; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA-binding, CRM domain (InterPro:IPR001890); BEST Arabidopsis thaliana protein match is: CRM family member 3A (TAIR:AT3G23070.1); Has 408 Blast hits to 338 proteins in 45 species: Archae - 2; Bacteria - 2; Metazoa - 32; Fungi - 6; Plants - 353; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003075.7 Reference assembly

    Range
    14569665..14573177
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_119121.3NP_194704.2  CRS1 / YhbY (CRM) domain-containing protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_194704.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A5S9XX20, A0A654FU45, F4JNR2
    Conserved Domains (2) summary
    smart01103
    Location:647734
    CRS1_YhbY; Escherichia coli YhbY is associated with pre-50S ribosomal subunits, which implies a function in ribosome assembly
    pfam01985
    Location:248327
    CRS1_YhbY; CRS1 / YhbY (CRM) domain
  2. NM_001341978.1NP_001329382.1  CRS1 / YhbY (CRM) domain-containing protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178UXG0, A0A1P8B7L2
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