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DNAJ heat shock family protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 828965, updated on 18-Sep-2024

Summary

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Official Full Name
DNAJ heat shock family protein
Primary source
TAIR:AT4G28480
Locus tag
AT4G28480
See related
Araport:AT4G28480
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F20O9.160; F20O9_160
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Genomic context

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Location:
chromosome: 4
Exon count:
3
Sequence:
Chromosome: 4; NC_003075.7 (14073008..14075271)

Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene 26S proteasome regulatory subunit S2 1B Neighboring gene transmembrane protein, putative (DUF679 domain membrane protein 7) Neighboring gene Leucine-rich receptor-like protein kinase family protein Neighboring gene NAC domain containing protein 73

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003075.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Capturing the phosphorylation and protein interaction landscape of the plant TOR kinase. Van Leene J, et al. Nat Plants, 2019 Mar. PMID 30833711
  2. Advanced proteomic analyses yield a deep catalog of ubiquitylation targets in Arabidopsis. Kim DY, et al. Plant Cell, 2013 May. PMID 23667124, Free PMC Article
  3. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

NM_001084989.1
NM_118990.4

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables unfolded protein binding IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in protein folding IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in cytoplasm ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
DNAJ heat shock family protein
NP_001078458.1
  • DNAJ heat shock family protein; FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), HSP40/DnaJ peptide-binding (InterPro:IPR008971), Chaperone DnaJ, C-terminal (InterPro:IPR002939), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ, conserved site (InterPro:IPR018253); BEST Arabidopsis thaliana protein match is: DNAJ heat shock family protein (TAIR:AT2G20560.1); Has 31762 Blast hits to 27589 proteins in 3462 species: Archae - 234; Bacteria - 13218; Metazoa - 4873; Fungi - 2833; Plants - 3009; Viruses - 19; Other Eukaryotes - 7576 (source: NCBI BLink).
NP_194577.1
  • DNAJ heat shock family protein; FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), HSP40/DnaJ peptide-binding (InterPro:IPR008971), Chaperone DnaJ, C-terminal (InterPro:IPR002939), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095), Heat shock protein DnaJ, conserved site (InterPro:IPR018253); BEST Arabidopsis thaliana protein match is: DNAJ heat shock family protein (TAIR:AT2G20560.1); Has 28075 Blast hits to 27586 proteins in 3414 species: Archae - 196; Bacteria - 10500; Metazoa - 4718; Fungi - 2638; Plants - 2903; Viruses - 17; Other Eukaryotes - 7103 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003075.7 Reference assembly

    Range
    14073008..14075271
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_118990.4 → NP_194577.1  DNAJ heat shock family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_194577.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178V4Q1, O49457
    Conserved Domains (1) summary
    COG0484
    Location:1 → 346
    DnaJ; DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones]

  2. NM_001084989.1 → NP_001078458.1  DNAJ heat shock family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_001078458.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A8MR40
    Conserved Domains (3) summary
    cd10747
    Location:151 → 277
    DnaJ_C; C-terminal substrate binding domain of DnaJ and HSP40
    COG0484
    Location:1 → 288
    DnaJ; DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones]
    pfam00226
    Location:4 → 67
    DnaJ; DnaJ domain
Nucleotide Protein
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