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uncharacterized protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 828917, updated on 18-Sep-2024

Summary

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Official Full Name
uncharacterized protein
Primary source
TAIR:AT4G28025
Locus tag
AT4G28025
See related
Araport:AT4G28025
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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Genomic context

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Location:
chromosome: 4
Exon count:
5
Sequence:
Chromosome: 4; NC_003075.7 (13935538..13937555, complement)

Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene NADH dehydrogenase ubiquinone 1 alpha subcomplex subunit Neighboring gene Tetratricopeptide repeat (TPR)-like superfamily protein Neighboring gene tRNA-thr(GGU) m(6)t(6)A37 methyltransferase Neighboring gene Acyl-CoA N-acyltransferases (NAT) superfamily protein Neighboring gene nodulin MtN21 /EamA-like transporter family protein Neighboring gene tetraspanin7

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003075.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. New functions of the thylakoid membrane proteome of Arabidopsis thaliana revealed by a simple, fast, and versatile fractionation strategy. Peltier JB, et al. J Biol Chem, 2004 Nov 19. PMID 15322131
  2. AT_CHLORO, a comprehensive chloroplast proteome database with subplastidial localization and curated information on envelope proteins. Ferro M, et al. Mol Cell Proteomics, 2010 Jun. PMID 20061580, Free PMC Article
  3. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

GeneRIFs: Gene References Into Functions

General gene information

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NM_001203927.2

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in chloroplast ISM
Inferred from Sequence Model
more info
  
located_in chloroplast thylakoid HDA PubMed 
located_in chloroplast thylakoid membrane HDA PubMed 

General protein information

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Preferred Names
uncharacterized protein
NP_001190856.1
  • unknown protein.
NP_567794.1
  • unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003075.7 Reference assembly

    Range
    13935538..13937555 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_118941.5 → NP_567794.1  uncharacterized protein AT4G28025 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_567794.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178UYC4, A0A5S9XWI9, Q8LBN1, Q9C5F3

  2. NM_001203927.2 → NP_001190856.1  uncharacterized protein AT4G28025 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_001190856.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A5S9XWI9, F4JKG2, Q8LBN1
Nucleotide Protein
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