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NQ491_RS06900 polysaccharide deacetylase family protein [ Alistipes ihumii AP11 ]

Gene ID: 82891448, updated on 11-Dec-2024

Summary

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Gene symbol
NQ491_RS06900
Gene description
polysaccharide deacetylase family protein
Locus tag
NQ491_RS06900
Gene type
protein coding
Organism
Alistipes ihumii AP11 (strain: AP11, nat-host: Homo sapiens, type-material: type strain of Alistipes ihumii)
Lineage
Bacteria; Pseudomonadati; Bacteroidota; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes
Old locus tag
NQ491_06900
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Genomic context

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NZ_CP102294.1Genomic Context describing neighboring genes Neighboring gene aminopeptidase P family protein Neighboring gene Tex family protein Neighboring gene UbiX family flavin prenyltransferase Neighboring gene Holliday junction branch migration DNA helicase RuvB

Genomic regions, transcripts, and products

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Genomic Sequence:
NZ_CP102294.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Carbohydrate esterase family 4 enzymes: substrate specificity. Caufrier F, et al. Carbohydr Res, 2003 Mar 28. PMID 12644381
  2. Design, construction, and in vivo augmentation of a complex gut microbiome. Cheng AG, et al. Cell, 2022 Sep 15. PMID 36070752, Free PMC Article

GeneRIFs: Gene References Into Functions

General protein information

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Preferred Names
polysaccharide deacetylase family protein
WP_019246197.1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NZ_CP102294.1 Reference assembly

    Range
    1697468..1698076
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    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_019246197.1 MULTISPECIES: polysaccharide deacetylase family protein [Alistipes]

    UniProtKB/TrEMBL
    A0A9E0UL46
    Conserved Domains (2) summary
    TIGR04243
    Location:25 → 195
    nodulat_NodB; chitooligosaccharide deacetylase NodB
    cd10917
    Location:25 → 190
    CE4_NodB_like_6s_7s; Catalytic NodB homology domain of rhizobial NodB-like proteins