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Major facilitator superfamily protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 828886, updated on 18-Sep-2024

Summary

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Official Full Name
Major facilitator superfamily protein
Primary source
TAIR:AT4G27720
Locus tag
AT4G27720
See related
Araport:AT4G27720
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
T29A15.210; T29A15_210
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Genomic context

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Location:
chromosome: 4
Exon count:
8
Sequence:
Chromosome: 4; NC_003075.7 (13830827..13833814)

Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene vacuolar protein sorting 26B Neighboring gene Rhodanese/Cell cycle control phosphatase superfamily protein Neighboring gene cytochrome P450, family 709, subfamily B, polypeptide 3 Neighboring gene oligopeptide transporter 1 Neighboring gene ncRNA Neighboring gene Yippee family putative zinc-binding protein Neighboring gene Yippee family putative zinc-binding protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003075.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. NAC transcription factors ATAF1 and ANAC055 affect the heat stress response in Arabidopsis. Alshareef NO, et al. Sci Rep, 2022 Jul 4. PMID 35787631, Free PMC Article
  2. Label-free protein quantification for plant Golgi protein localization and abundance. Nikolovski N, et al. Plant Physiol, 2014 Oct. PMID 25122472, Free PMC Article
  3. Identification of new intrinsic proteins in Arabidopsis plasma membrane proteome. Marmagne A, et al. Mol Cell Proteomics, 2004 Jul. PMID 15060130
  4. Separating Golgi Proteins from Cis to Trans Reveals Underlying Properties of Cisternal Localization. Parsons HT, et al. Plant Cell, 2019 Sep. PMID 31266899, Free PMC Article
  5. Isolation and proteomic characterization of the Arabidopsis Golgi defines functional and novel components involved in plant cell wall biosynthesis. Parsons HT, et al. Plant Physiol, 2012 May. PMID 22430844, Free PMC Article

See all (7) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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NM_118911.4

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molybdate ion transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in molybdate ion transport IEA
Inferred from Electronic Annotation
more info
  
involved_in response to heat IEP
Inferred from Expression Pattern
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus HDA PubMed 
located_in Golgi apparatus IDA
Inferred from Direct Assay
more info
 PubMed 
located_in Golgi trans cisterna HDA PubMed 
located_in endosome HDA PubMed 
located_in plasma membrane HDA PubMed 
located_in trans-Golgi network HDA PubMed 

General protein information

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Preferred Names
Major facilitator superfamily protein
NP_567786.1
  • Major facilitator superfamily protein; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF791 (InterPro:IPR008509), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT3G49310.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003075.7 Reference assembly

    Range
    13830827..13833814
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_118911.4 → NP_567786.1  Major facilitator superfamily protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_567786.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178UZD4, A0A5S9XX60, Q9C5R0
    Conserved Domains (2) summary
    pfam07690
    Location:43 → 392
    MFS_1; Major Facilitator Superfamily
    cl21472
    Location:4 → 358
    MFS; The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of ...
Nucleotide Protein
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