Met-10+ like family protein [Arabidopsis thaliana (thale cress)] - Gene

Summary

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Official Full Name: Met-10+ like family protein
Primary source: TAIR:AT4G27340
Locus tag: AT4G27340
See related: Araport:AT4G27340
Gene type: protein coding
RefSeq status: REVIEWED
Organism: Arabidopsis thaliana (ecotype: Columbia)
Lineage: Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as: F27G19.9
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Genomic context

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See in Genome Data Viewer

Location:: chromosome: 4

Exon count:: 9

Sequence:: Chromosome: 4; NC_003075.7 (13687174..13690538, complement)

Chromosome 4 - NC_003075.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Go to reference sequence details

Genomic Sequence:: NC_003075.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

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Interactions

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Products	Interactant	Other Gene	Complex	Source	Pubs	Description

General gene information

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NM_001341846.1

Supported by ESTs:

NM_001341847.1

Supported by ESTs:

NM_118868.5

Supported by ESTs:

Gene Ontology Provided by TAIR

Function	Evidence Code	Pubs
enables tRNA (guanine(37)-N1)-methyltransferase activity	IEA Inferred from Electronic Annotation more info
enables tRNA 4-demethylwyosine alpha-amino-alpha-carboxypropyltransferase activity	IEA Inferred from Electronic Annotation more info

Component	Evidence Code	Pubs
located_in chloroplast	ISM Inferred from Sequence Model more info

General protein information

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Preferred Names: Met-10+ like family protein

NP_194464.3

Met-10+ like family protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function Met10 (InterPro:IPR003402); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT3G56120.1); Has 1666 Blast hits to 1640 proteins in 617 species: Archae - 405; Bacteria - 591; Metazoa - 172; Fungi - 146; Plants - 123; Viruses - 0; Other Eukaryotes - 229 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

NC_003075.7 Reference assembly

Range

13687174..13690538 complement

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GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

NM_118868.5 → NP_194464.3 Met-10+ like family protein [Arabidopsis thaliana]

See identical proteins and their annotated locations for NP_194464.3

Status: REVIEWED

UniProtKB/Swiss-Prot

O81837, Q6NQ64

UniProtKB/TrEMBL

A0A178V2B7, A0A5S9XX80, A0A654FTB1

Conserved Domains (1) summary

COG2520
Location:328 → 599

Trm5; tRNA G37 N-methylase Trm5 [Translation, ribosomal structure and biogenesis]
NM_001341846.1 → NP_001329896.1 Met-10+ like family protein [Arabidopsis thaliana]

Status: REVIEWED

UniProtKB/TrEMBL

A0A1P8B968, A0A7G2F423
NM_001341847.1 → NP_001329895.1 Met-10+ like family protein [Arabidopsis thaliana]

Status: REVIEWED

UniProtKB/TrEMBL

A0A1P8B962