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START (StAR-related lipid-transfer) lipid-binding domain-containing protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 828799, updated on 18-Sep-2024

Summary

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Official Full Name
START (StAR-related lipid-transfer) lipid-binding domain-containing protein
Primary source
TAIR:AT4G26920
Locus tag
AT4G26920
See related
Araport:AT4G26920
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F10M23.260; F10M23_260
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Genomic context

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Location:
chromosome: 4
Exon count:
5
Sequence:
Chromosome: 4; NC_003075.7 (13525031..13527172)

Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene mitogen-activated protein kinase kinase kinase 16 Neighboring gene HIS HF Neighboring gene Dihydrolipoamide succinyltransferase Neighboring gene myb domain protein 97 Neighboring gene Galactosyltransferase family protein Neighboring gene senescence regulator (Protein of unknown function, DUF584)

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003075.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Identification and molecular properties of SUMO-binding proteins in Arabidopsis. Park HC, et al. Mol Cells, 2011 Aug. PMID 21607647, Free PMC Article
  2. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables lipid binding IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in nucleus ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
START (StAR-related lipid-transfer) lipid-binding domain-containing protein
NP_194422.1
  • START (StAR-related lipid-transfer) lipid-binding domain; CONTAINS InterPro DOMAIN/s: Lipid-binding START (InterPro:IPR002913); BEST Arabidopsis thaliana protein match is: START (StAR-related lipid-transfer) lipid-binding domain (TAIR:AT5G07260.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003075.7 Reference assembly

    Range
    13525031..13527172
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_118826.1 → NP_194422.1  START (StAR-related lipid-transfer) lipid-binding domain-containing protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_194422.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q9M0J8, Q9SZ32
    Conserved Domains (1) summary
    cl14643
    Location:69 → 228
    SRPBCC; START/RHO_alpha_C/PITP/Bet_v1/CoxG/CalC (SRPBCC) ligand-binding domain superfamily
Nucleotide Protein
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