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4/1 protein short form protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 828708, updated on 18-Sep-2024

Summary

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Official Full Name
4/1 protein short form protein
Primary source
TAIR:AT4G26020
Locus tag
AT4G26020
See related
Araport:AT4G26020
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F20B18.130; F20B18_130
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Genomic context

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Location:
chromosome: 4
Exon count:
9
Sequence:
Chromosome: 4; NC_003075.7 (13200861..13204057, complement)

Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene peroxidase superfamily protein Neighboring gene CCT motif family protein Neighboring gene RNA-binding KH domain-containing protein Neighboring gene Peroxidase superfamily protein Neighboring gene C2H2-like zinc finger protein Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003075.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. At-4/1, an interactor of the Tomato spotted wilt virus movement protein, belongs to a new family of plant proteins capable of directed intra- and intercellular trafficking. Paape M, et al. Mol Plant Microbe Interact, 2006 Aug. PMID 16903353
  2. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

GeneRIFs: Gene References Into Functions

General gene information

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Homology

NM_118735.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables protein binding IPI
Inferred from Physical Interaction
more info
 PubMed 
Process Evidence Code Pubs
involved_in intercellular transport IDA
Inferred from Direct Assay
more info
 PubMed 
involved_in intracellular transport IDA
Inferred from Direct Assay
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IDA
Inferred from Direct Assay
more info
 PubMed 
located_in intracellular anatomical structure IDA
Inferred from Direct Assay
more info
 PubMed 
located_in plasmodesma IDA
Inferred from Direct Assay
more info
 PubMed 

General protein information

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Preferred Names
4/1 protein short form protein
NP_001190843.1
  • unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: embryo, flower, seed; EXPRESSED DURING: petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage.
NP_194332.2
  • unknown protein; Has 17652 Blast hits to 12460 proteins in 982 species: Archae - 248; Bacteria - 2077; Metazoa - 7446; Fungi - 1455; Plants - 656; Viruses - 34; Other Eukaryotes - 5736 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003075.7 Reference assembly

    Range
    13200861..13204057 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001341773.1 → NP_001329294.1  4/1 protein short form protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    A0MF98, Q1PE49, Q84UC5, Q9SZH6
    UniProtKB/TrEMBL
    A0A5S9XW11, A0A654FSU1, A0A7G2F5K3
    Conserved Domains (1) summary
    COG1196
    Location:47 → 246
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]

  2. NM_001203914.2 → NP_001190843.1  4/1 protein short form protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_001190843.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    F4JU48
    Conserved Domains (1) summary
    pfam01576
    Location:40 → 203
    Myosin_tail_1; Myosin tail

  3. NM_118735.3 → NP_194332.2  4/1 protein short form protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_194332.2

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    A0MF98, Q1PE49, Q84UC5, Q9SZH6
    UniProtKB/TrEMBL
    A0A5S9XW11, A0A654FSU1, A0A7G2F5K3
    Conserved Domains (1) summary
    COG1196
    Location:47 → 246
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q1PE49.1

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