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LOC8286988 binding partner of ACD11 1 [ Ricinus communis (castor bean) ]

Gene ID: 8286988, updated on 30-Nov-2023

Summary

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Gene symbol
LOC8286988
Gene description
binding partner of ACD11 1
Locus tag
RCOM_0697220
Gene type
protein coding
RefSeq status
MODEL
Organism
Ricinus communis
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Acalyphoideae; Acalypheae; Ricinus
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Genomic context

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See LOC8286988 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
5
Annotation release Status Assembly Chr Location
102 current ASM1957865v1 (GCF_019578655.1) 1 NC_063256.1 (4401108..4403611)
101 previous assembly JCVI_RCG_1.1 (GCF_000151685.1) Unplaced Scaffold NW_002994353.1 (32771..35318)

Chromosome 1 - NC_063256.1Genomic Context describing neighboring genes Neighboring gene peptidyl-prolyl cis-trans isomerase CYP23 Neighboring gene transcription factor PRE6 Neighboring gene sucrose transport protein SUC3 Neighboring gene homeobox-leucine zipper protein ATHB-13

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
binding partner of ACD11 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ricinus communis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1957865v1

Genomic

  1. NC_063256.1 Reference ASM1957865v1

    Range
    4401108..4403611
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015719767.3 → XP_015575253.1  binding partner of ACD11 1

    UniProtKB/TrEMBL
    B9S290
    Conserved Domains (1) summary
    PLN03121
    Location:1 → 245
    PLN03121; nucleic acid binding protein; Provisional

  2. XM_002520063.4 → XP_002520109.1  binding partner of ACD11 1

    See identical proteins and their annotated locations for XP_002520109.1

    UniProtKB/TrEMBL
    B9S290
    Conserved Domains (1) summary
    PLN03121
    Location:1 → 245
    PLN03121; nucleic acid binding protein; Provisional
Nucleotide Protein
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