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SRS2 P-loop containing nucleoside triphosphate hydrolases superfamily protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 828615, updated on 18-Sep-2024

Summary

Official Symbol
SRS2
Official Full Name
P-loop containing nucleoside triphosphate hydrolases superfamily protein
Primary source
TAIR:AT4G25120
Locus tag
AT4G25120
See related
Araport:AT4G25120
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
ARABIDOPSIS THALIANA SUPPRESSOR OF RAD SIX-SCREEN MUTANT 2; ATSRS2; F24A6.8; SUPPRESSOR OF RAD SIX-SCREEN MUTANT 2
Summary
Encodes a homolog of the yeast SRS2 (Suppressor of RAD Six-screen mutant 2) helicase. The Arabidopsis SRS2 is a functional 3#Aeo- to 5#Aeo-helicase. Biochemical studies show that SRS2 disrupts recombinogenic DNA intermediates and facilitates single strand annealing.
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Genomic context

See SRS2 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
29
Sequence:
Chromosome: 4; NC_003075.7 (12890545..12898501)

Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene Fe superoxide dismutase 1 Neighboring gene metacaspase 2 Neighboring gene peptide met sulfoxide reductase 4 Neighboring gene oleosin 1 Neighboring gene HAD superfamily, subfamily IIIB acid phosphatase

General gene information

NM_001341722.1

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables 3'-5' DNA helicase activity IDA
Inferred from Direct Assay
more info
PubMed 
enables DNA helicase activity IDA
Inferred from Direct Assay
more info
PubMed 
Component Evidence Code Pubs
located_in nucleus ISM
Inferred from Sequence Model
more info
 

General protein information

Preferred Names
P-loop containing nucleoside triphosphate hydrolases superfamily protein
NP_001320059.1
  • SUPPRESSOR OF RAD SIX-SCREEN MUTANT 2 (SRS2); CONTAINS InterPro DOMAIN/s: DNA helicase, UvrD-like, C-terminal (InterPro:IPR014017), Helicase, superfamily 1, UvrD-related (InterPro:IPR014016), DNA helicase, UvrD/REP type (InterPro:IPR000212); Has 26201 Blast hits to 22116 proteins in 2711 species: Archae - 259; Bacteria - 18888; Metazoa - 18; Fungi - 176; Plants - 81; Viruses - 13; Other Eukaryotes - 6766 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003075.7 Reference assembly

    Range
    12890545..12898501
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001341722.1NP_001320059.1  P-loop containing nucleoside triphosphate hydrolases superfamily protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    D1KF50, F4JSH5, Q9SW14
    UniProtKB/TrEMBL
    A0A5S9XXU5, A0A654FSK4