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PAP24 purple acid phosphatase 24 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 828591, updated on 18-Sep-2024

Summary

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Official Symbol
PAP24
Official Full Name
purple acid phosphatase 24
Primary source
TAIR:AT4G24890
Locus tag
AT4G24890
See related
Araport:AT4G24890
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
ARABIDOPSIS THALIANA PURPLE ACID PHOSPHATASE 24; ATPAP24; F13M23.30; F13M23_30; purple acid phosphatase 24
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Genomic context

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See PAP24 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
12
Sequence:
Chromosome: 4; NC_003075.7 (12811354..12814456, complement)

Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene oligomeric golgi complex subunit-like protein Neighboring gene P-loop containing nucleoside triphosphate hydrolases superfamily protein Neighboring gene snurportin-1 protein Neighboring gene coiled coil protein Neighboring gene glucuronoxylan 4-O-methyltransferase-like protein (DUF579) Neighboring gene secE/sec61-gamma protein transport protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003075.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Expression patterns of purple acid phosphatase genes in Arabidopsis organs and functional analysis of AtPAP23 predominantly transcribed in flower. Zhu H, et al. Plant Mol Biol, 2005 Nov. PMID 16244908
  2. Proteomics of loosely bound cell wall proteins of Arabidopsis thaliana cell suspension cultures: a critical analysis. Borderies G, et al. Electrophoresis, 2003 Oct. PMID 14595688
  3. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

GeneRIFs: Gene References Into Functions

General gene information

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NM_118621.4

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables acid phosphatase activity ISS
Inferred from Sequence or Structural Similarity
more info
 PubMed 
Process Evidence Code Pubs
acts_upstream_of_or_within dephosphorylation ISS
Inferred from Sequence or Structural Similarity
more info
 PubMed 
Component Evidence Code Pubs
located_in chloroplast ISM
Inferred from Sequence Model
more info
  
located_in plant-type cell wall HDA PubMed 

General protein information

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Preferred Names
purple acid phosphatase 24
NP_194219.2
  • purple acid phosphatase 24 (PAP24); FUNCTIONS IN: protein serine/threonine phosphatase activity, acid phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cell wall; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: C globular stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Metallophosphoesterase (InterPro:IPR004843), Purple acid phosphatase-like, N-terminal (InterPro:IPR008963); BEST Arabidopsis thaliana protein match is: purple acid phosphatase 27 (TAIR:AT5G50400.1); Has 1710 Blast hits to 1696 proteins in 329 species: Archae - 2; Bacteria - 449; Metazoa - 190; Fungi - 73; Plants - 756; Viruses - 0; Other Eukaryotes - 240 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003075.7 Reference assembly

    Range
    12811354..12814456 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_118621.4 → NP_194219.2  purple acid phosphatase 24 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_194219.2

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q5MAV0, Q8H1R2, Q9SW37
    UniProtKB/TrEMBL
    A0A178UU03
    Conserved Domains (3) summary
    cd00839
    Location:286 → 595
    MPP_PAPs; purple acid phosphatases of the metallophosphatase superfamily, metallophosphatase domain
    pfam17808
    Location:52 → 168
    fn3_PAP; Fn3-like domain from Purple Acid Phosphatase
    pfam16656
    Location:172 → 278
    Pur_ac_phosph_N; Purple acid Phosphatase, N-terminal domain
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q8H1R2.1

Gene LinkOut

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