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CRK20 cysteine-rich RLK (RECEPTOR-like protein kinase) 20 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 828427, updated on 18-Sep-2024

Summary

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Official Symbol
CRK20
Official Full Name
cysteine-rich RLK (RECEPTOR-like protein kinase) 20
Primary source
TAIR:AT4G23280
Locus tag
AT4G23280
See related
Araport:AT4G23280
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
cysteine-rich RLK (RECEPTOR-like protein kinase) 20; F21P8.170; F21P8_170
Summary
Encodes a cysteine-rich receptor-like protein kinase.
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Genomic context

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See CRK20 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
7
Sequence:
Chromosome: 4; NC_003075.7 (12174733..12177576)

Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene cysteine-rich RLK (RECEPTOR-like protein kinase) 18 Neighboring gene cysteine-rich RLK (RECEPTOR-like protein kinase) 19 Neighboring gene uncharacterized protein Neighboring gene cysteine-rich RLK (RECEPTOR-like protein kinase) 21 Neighboring gene cysteine-rich RLK (RECEPTOR-like protein kinase) 22

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003075.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The Arabidopsis thaliana cysteine-rich receptor-like kinase CRK20 modulates host responses to Pseudomonas syringae pv. tomato DC3000 infection. Ederli L, et al. J Plant Physiol, 2011 Oct 15. PMID 21742407
  2. Identification of genes encoding receptor-like protein kinases as possible targets of pathogen- and salicylic acid-induced WRKY DNA-binding proteins in Arabidopsis. Du L, et al. Plant J, 2000 Dec. PMID 11135117
  3. Activation of hypersensitive cell death by pathogen-induced receptor-like protein kinases from Arabidopsis. Chen K, et al. Plant Mol Biol, 2004 Sep. PMID 15604743
  4. Sorting signals, N-terminal modifications and abundance of the chloroplast proteome. Zybailov B, et al. PLoS One, 2008 Apr 23. PMID 18431481, Free PMC Article
  5. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. The CRK20 gene is induced rapidly in response to both O(3) and Pseudomonas syringae, and that CRK20 disruption causes a restriction in the bacterial growth.
    Title: The Arabidopsis thaliana cysteine-rich receptor-like kinase CRK20 modulates host responses to Pseudomonas syringae pv. tomato DC3000 infection.
Submit: New GeneRIF Correction

General gene information

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Homology

NM_001341595.1
NM_001341597.1

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables kinase activity ISS
Inferred from Sequence or Structural Similarity
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within defense response TAS
Traceable Author Statement
more info
 PubMed 
acts_upstream_of_or_within defense response to bacterium IEP
Inferred from Expression Pattern
more info
 PubMed 
acts_upstream_of_or_within programmed cell death IMP
Inferred from Mutant Phenotype
more info
 PubMed 
acts_upstream_of_or_within response to salicylic acid IEP
Inferred from Expression Pattern
more info
 PubMed 
Component Evidence Code Pubs
located_in chloroplast HDA PubMed 
located_in extracellular region ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
cysteine-rich RLK (RECEPTOR-like protein kinase) 20
NP_001320044.1
  • cysteine-rich RLK (RECEPTOR-like protein kinase) 20 (CRK20); FUNCTIONS IN: kinase activity; INVOLVED IN: defense response to bacterium, defense response, programmed cell death, response to salicylic acid stimulus; LOCATED IN: chloroplast; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Protein of unknown function DUF26 (InterPro:IPR002902), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: cysteine-rich RLK (RECEPTOR-like protein kinase) 19 (TAIR:AT4G23270.1); Has 119459 Blast hits to 118018 proteins in 4463 species: Archae - 96; Bacteria - 13614; Metazoa - 44023; Fungi - 10123; Plants - 33901; Viruses - 397; Other Eukaryotes - 17305 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003075.7 Reference assembly

    Range
    12174733..12177576
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001341596.1 → NP_001328177.1  cysteine-rich RLK (RECEPTOR-like protein kinase) 20 [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178V3B6, A0A1P8B3T4

  2. NM_001341595.1 → NP_001320044.1  cysteine-rich RLK (RECEPTOR-like protein kinase) 20 [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    F4JNH5, O65479
    UniProtKB/TrEMBL
    A0A178V3B6
    Conserved Domains (3) summary
    smart00219
    Location:347 → 616
    TyrKc; Tyrosine kinase, catalytic domain
    cd14066
    Location:350 → 617
    STKc_IRAK; Catalytic domain of the Serine/Threonine kinases, Interleukin-1 Receptor Associated Kinases and related STKs
    pfam01657
    Location:32 → 127
    Stress-antifung; Salt stress response/antifungal

  3. NM_001341597.1 → NP_001328178.1  cysteine-rich RLK (RECEPTOR-like protein kinase) 20 [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178V3B6, A0A1P8B3T1, A0A5S9XVX9
    Conserved Domains (2) summary
    pfam01657
    Location:32 → 127
    Stress-antifung; Salt stress response/antifungal
    cl21453
    Location:350 → 567
    PKc_like; Protein Kinases, catalytic domain
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
O65479.2

Gene LinkOut

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