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CRK11 cysteine-rich RLK (RECEPTOR-like protein kinase) 11 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 828418, updated on 18-Sep-2024

Summary

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Official Symbol
CRK11
Official Full Name
cysteine-rich RLK (RECEPTOR-like protein kinase) 11
Primary source
TAIR:AT4G23190
Locus tag
AT4G23190
See related
Araport:AT4G23190
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
AT-RLK3; cysteine-rich RLK (RECEPTOR-like protein kinase) 11; F21P8.80; F21P8_80; RECEPTOR LIKE PROTEIN KINASE 3
Summary
Encodes putative receptor-like protein kinase that is induced by the soil-borne vascular bacteria, Ralstonia solanacearum. Naming convention from Chen et al 2003 (PMID 14756307)
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Genomic context

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See CRK11 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
7
Sequence:
Chromosome: 4; NC_003075.7 (12140899..12143858, complement)

Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene cysteine-rich RECEPTOR-like kinase Neighboring gene receptor-like protein kinase-related family protein Neighboring gene cysteine-rich RLK (RECEPTOR-like protein kinase) 10 Neighboring gene ncRNA Neighboring gene cysteine-rich RLK (RECEPTOR-like protein kinase) 12

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003075.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Characterization of an Arabidopsis thaliana receptor-like protein kinase gene activated by oxidative stress and pathogen attack. Czernic P, et al. Plant J, 1999 May. PMID 10377997
  2. Border control--a membrane-linked interactome of Arabidopsis. Jones AM, et al. Science, 2014 May 16. PMID 24833385
  3. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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NM_001341581.1
NM_001341582.1
NM_001341583.1
NM_118448.4

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables kinase activity ISS
Inferred from Sequence or Structural Similarity
more info
  
enables protein kinase activity ISS
Inferred from Sequence or Structural Similarity
more info
 PubMed 
Process Evidence Code Pubs
acts_upstream_of_or_within defense response to bacterium IEP
Inferred from Expression Pattern
more info
 PubMed 
acts_upstream_of_or_within response to oxidative stress IEP
Inferred from Expression Pattern
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane ISS
Inferred from Sequence or Structural Similarity
more info
 PubMed 
located_in nucleus ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
cysteine-rich RLK (RECEPTOR-like protein kinase) 11
NP_194050.2
  • cysteine-rich RLK (RECEPTOR-like protein kinase) 11 (CRK11); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Protein of unknown function DUF26 (InterPro:IPR002902), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: cysteine-rich RLK (RECEPTOR-like protein kinase) 22 (TAIR:AT4G23300.1); Has 122786 Blast hits to 121167 proteins in 4390 species: Archae - 103; Bacteria - 13685; Metazoa - 45057; Fungi - 10628; Plants - 34657; Viruses - 456; Other Eukaryotes - 18200 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003075.7 Reference assembly

    Range
    12140899..12143858 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_118448.4 → NP_194050.2  cysteine-rich RLK (RECEPTOR-like protein kinase) 11 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_194050.2

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    O65471, Q9ZP16
    UniProtKB/TrEMBL
    A0A178UYL6
    Conserved Domains (3) summary
    smart00219
    Location:355 → 624
    TyrKc; Tyrosine kinase, catalytic domain
    cd14066
    Location:356 → 625
    STKc_IRAK; Catalytic domain of the Serine/Threonine kinases, Interleukin-1 Receptor Associated Kinases and related STKs
    pfam01657
    Location:26 → 125
    Stress-antifung; Salt stress response/antifungal

  2. NM_001341581.1 → NP_001329689.1  cysteine-rich RLK (RECEPTOR-like protein kinase) 11 [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178UYL6, A0A1P8B8G3

  3. NM_001341582.1 → NP_001329690.1  cysteine-rich RLK (RECEPTOR-like protein kinase) 11 [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178UYL6, A0A1P8B8H5

  4. NM_001341583.1 → NP_001329691.1  cysteine-rich RLK (RECEPTOR-like protein kinase) 11 [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178UYL6, A0A1P8B8H5
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9ZP16.2

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