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FAM63A-like protein (DUF544) [ Arabidopsis thaliana (thale cress) ]

Gene ID: 828395, updated on 18-Sep-2024

Summary

Official Full Name
FAM63A-like protein (DUF544)
Primary source
TAIR:AT4G22960
Locus tag
AT4G22960
See related
Araport:AT4G22960
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F7H19.140; F7H19_140
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Genomic context

Location:
chromosome: 4
Exon count:
12
Sequence:
Chromosome: 4; NC_003075.7 (12030020..12033380)

Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene pyrimidin 4 Neighboring gene Protein kinase superfamily protein Neighboring gene AGAMOUS-like 19 Neighboring gene separase Neighboring gene molybdenum cofactor sulfurase-like protein

General gene information

NM_118425.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables K48-linked deubiquitinase activity IEA
Inferred from Electronic Annotation
more info
 
enables cysteine-type deubiquitinase activity IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
located_in cytoplasm ISM
Inferred from Sequence Model
more info
 

General protein information

Preferred Names
FAM63A-like protein (DUF544)
NP_194027.2
  • Protein of unknown function (DUF544); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF544 (InterPro:IPR007518); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF544) (TAIR:AT4G11860.1); Has 737 Blast hits to 425 proteins in 174 species: Archae - 0; Bacteria - 23; Metazoa - 282; Fungi - 261; Plants - 75; Viruses - 0; Other Eukaryotes - 96 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003075.7 Reference assembly

    Range
    12030020..12033380
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_118425.3NP_194027.2  FAM63A-like protein (DUF544) [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_194027.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178V3G0, A0A654FRX9, F4JMQ2
    Conserved Domains (1) summary
    pfam04424
    Location:45147
    MINDY_DUB; MINDY deubiquitinase