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MATE efflux family protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 828280, updated on 18-Sep-2024

Summary

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Official Full Name
MATE efflux family protein
Primary source
TAIR:AT4G21910
Locus tag
AT4G21910
See related
Araport:AT4G21910
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
T8O5.120; T8O5_120
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Genomic context

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Location:
chromosome: 4
Exon count:
7
Sequence:
Chromosome: 4; NC_003075.7 (11625309..11631255, complement)

Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene MATE efflux family protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene senescence regulator (Protein of unknown function, DUF584)

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003075.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Border control--a membrane-linked interactome of Arabidopsis. Jones AM, et al. Science, 2014 May 16. PMID 24833385
  2. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

NM_001341522.1
NM_118312.2
NM_202859.2

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables antiporter activity IEA
Inferred from Electronic Annotation
more info
  
enables xenobiotic transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in xenobiotic detoxification by transmembrane export across the plasma membrane IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in chloroplast ISM
Inferred from Sequence Model
more info
  
located_in plasma membrane ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
MATE efflux family protein
NP_001320028.1
  • MATE efflux family protein; FUNCTIONS IN: antiporter activity, drug transmembrane transporter activity, transporter activity; INVOLVED IN: drug transmembrane transport, transmembrane transport; LOCATED IN: membrane; CONTAINS InterPro DOMAIN/s: Multi antimicrobial extrusion protein MatE (InterPro:IPR002528); BEST Arabidopsis thaliana protein match is: MATE efflux family protein (TAIR:AT4G21903.2).
NP_567640.1
  • MATE efflux family protein; FUNCTIONS IN: antiporter activity, drug transmembrane transporter activity, transporter activity; INVOLVED IN: drug transmembrane transport, transmembrane transport; LOCATED IN: membrane; CONTAINS InterPro DOMAIN/s: Multi antimicrobial extrusion protein MatE (InterPro:IPR002528); BEST Arabidopsis thaliana protein match is: MATE efflux family protein (TAIR:AT4G21903.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
NP_974587.1
  • MATE efflux family protein; FUNCTIONS IN: antiporter activity, drug transmembrane transporter activity, transporter activity; INVOLVED IN: drug transmembrane transport, transmembrane transport; LOCATED IN: membrane; CONTAINS InterPro DOMAIN/s: Multi antimicrobial extrusion protein MatE (InterPro:IPR002528); BEST Arabidopsis thaliana protein match is: MATE efflux family protein (TAIR:AT4G21903.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
NP_974588.1
  • MATE efflux family protein; FUNCTIONS IN: antiporter activity, drug transmembrane transporter activity, transporter activity; INVOLVED IN: drug transmembrane transport, transmembrane transport; LOCATED IN: membrane; CONTAINS InterPro DOMAIN/s: Multi antimicrobial extrusion protein MatE (InterPro:IPR002528); BEST Arabidopsis thaliana protein match is: MATE efflux family protein (TAIR:AT4G21903.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003075.7 Reference assembly

    Range
    11625309..11631255 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_202858.2 → NP_974587.1  MATE efflux family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_974587.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A654FRJ8
    Conserved Domains (1) summary
    cd13132
    Location:57 → 492
    MATE_eukaryotic; Eukaryotic members of the multidrug and toxic compound extrusion (MATE) family

  2. NM_001341522.1 → NP_001320028.1  MATE efflux family protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A654FRJ8
    Conserved Domains (1) summary
    cd13132
    Location:57 → 492
    MATE_eukaryotic; Eukaryotic members of the multidrug and toxic compound extrusion (MATE) family

  3. NM_118312.2 → NP_567640.1  MATE efflux family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_567640.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    B9DGV2, F4JKC0, F4JKC2, O49714, Q8LDZ2, Q940N9
    UniProtKB/TrEMBL
    A0A5S9XV07
    Conserved Domains (1) summary
    cd13132
    Location:55 → 490
    MATE_eukaryotic; Eukaryotic members of the multidrug and toxic compound extrusion (MATE) family

  4. NM_202859.2 → NP_974588.1  MATE efflux family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_974588.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    B9DGV2, F4JKC0, F4JKC2, O49714, Q8LDZ2, Q940N9
    UniProtKB/TrEMBL
    A0A5S9XV07
    Conserved Domains (1) summary
    cd13132
    Location:55 → 490
    MATE_eukaryotic; Eukaryotic members of the multidrug and toxic compound extrusion (MATE) family
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q940N9.1

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