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ERD (early-responsive to dehydration stress) family protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 828143, updated on 18-Sep-2024

Summary

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Official Full Name
ERD (early-responsive to dehydration stress) family protein
Primary source
TAIR:AT4G02900
Locus tag
AT4G02900
See related
Araport:AT4G02900
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
T5J8.22; T5J8_22
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Genomic context

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Location:
chromosome: 4
Exon count:
11
Sequence:
Chromosome: 4; NC_003075.7 (1283655..1287832)

Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene ELKS/Rab6-interacting/CAST family protein Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene Ubiquitin family protein Neighboring gene ncRNA Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003075.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables calcium-activated cation channel activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in extracellular region ISM
Inferred from Sequence Model
more info
  
located_in plasma membrane ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
ERD (early-responsive to dehydration stress) family protein
NP_192199.1
  • ERD (early-responsive to dehydration stress) family protein; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF221 (InterPro:IPR003864); BEST Arabidopsis thaliana protein match is: ERD (early-responsive to dehydration stress) family protein (TAIR:AT3G21620.1); Has 1474 Blast hits to 1292 proteins in 188 species: Archae - 0; Bacteria - 2; Metazoa - 189; Fungi - 715; Plants - 435; Viruses - 0; Other Eukaryotes - 133 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003075.7 Reference assembly

    Range
    1283655..1287832
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001340407.1 → NP_001328397.1  ERD (early-responsive to dehydration stress) family protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1P8B4H7

  2. NM_001340408.1 → NP_001328398.1  ERD (early-responsive to dehydration stress) family protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178UWY1, A0A1P8B4I8, A0A5S9XQ82, A0A654FLD3
    Conserved Domains (2) summary
    COG5594
    Location:72 → 753
    COG5594; Uncharacterized integral membrane protein [Function unknown]
    pfam02714
    Location:371 → 642
    RSN1_7TM; Calcium-dependent channel, 7TM region, putative phosphate

  3. NM_001340409.1 → NP_001328396.1  ERD (early-responsive to dehydration stress) family protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178UWY1, A0A1P8B4I8, A0A5S9XQ82, A0A654FLD3
    Conserved Domains (2) summary
    COG5594
    Location:72 → 753
    COG5594; Uncharacterized integral membrane protein [Function unknown]
    pfam02714
    Location:371 → 642
    RSN1_7TM; Calcium-dependent channel, 7TM region, putative phosphate

  4. NM_116524.2 → NP_192199.1  ERD (early-responsive to dehydration stress) family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_192199.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9SY14, Q9ZT88
    UniProtKB/TrEMBL
    A0A097NUP8, A0A178UWY1, A0A654FLD3
    Conserved Domains (3) summary
    pfam02714
    Location:320 → 643
    RSN1_7TM; Calcium-dependent channel, 7TM region, putative phosphate
    pfam13967
    Location:30 → 177
    RSN1_TM; Late exocytosis, associated with Golgi transport
    pfam14703
    Location:235 → 298
    PHM7_cyt; Cytosolic domain of 10TM putative phosphate transporter
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9SY14.1

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