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B3 domain protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 828054, updated on 18-Sep-2024

Summary

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Official Full Name
B3 domain protein
Primary source
TAIR:AT4G03160
Locus tag
AT4G03160
See related
Araport:AT4G03160
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F4C21.8; F4C21_8
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Genomic context

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Location:
chromosome: 4
Exon count:
2
Sequence:
Chromosome: 4; NC_003075.7 (1397979..1398685)

Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene small GTPase-like protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene AP2/B3-like transcriptional factor family protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003075.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in nucleus ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
B3 domain protein
NP_192225.1
  • BEST Arabidopsis thaliana protein match is: AP2/B3-like transcriptional factor family protein (TAIR:AT4G03170.1); Has 46 Blast hits to 46 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 8; Fungi - 4; Plants - 29; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003075.7 Reference assembly

    Range
    1397979..1398685
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_116552.1 → NP_192225.1  B3 domain protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_192225.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9ZR15
    UniProtKB/TrEMBL
    A0A178UVK8
    Conserved Domains (1) summary
    cd10017
    Location:69 → 158
    B3_DNA; Plant-specific B3-DNA binding domain
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9ZR15.1

Gene LinkOut

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