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glycosyl transferase family 1 protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 828040, updated on 18-Sep-2024

Summary

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Official Full Name
glycosyl transferase family 1 protein
Primary source
TAIR:AT4G01210
Locus tag
AT4G01210
See related
Araport:AT4G01210
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F2N1.24; F2N1_24
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Genomic context

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Location:
chromosome: 4
Exon count:
14
Sequence:
Chromosome: 4; NC_003075.7 (507648..512852, complement)

Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene phosphatidylinositol phosphate kinase 10 Neighboring gene Calcium-dependent lipid-binding (CaLB domain) family protein Neighboring gene Nucleotide-diphospho-sugar transferase family protein Neighboring gene Reticulon family protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003075.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Separating Golgi Proteins from Cis to Trans Reveals Underlying Properties of Cisternal Localization. Parsons HT, et al. Plant Cell, 2019 Sep. PMID 31266899, Free PMC Article
  2. Putative glycosyltransferases and other plant Golgi apparatus proteins are revealed by LOPIT proteomics. Nikolovski N, et al. Plant Physiol, 2012 Oct. PMID 22923678, Free PMC Article
  3. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

GeneRIFs: Gene References Into Functions

General gene information

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NM_116351.7

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables glycosyltransferase activity ISM
Inferred from Sequence Model
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus HDA PubMed 
located_in Golgi cis cisterna HDA PubMed 
located_in endosome HDA PubMed 
located_in mitochondrion ISM
Inferred from Sequence Model
more info
  
located_in trans-Golgi network HDA PubMed 

General protein information

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Preferred Names
glycosyl transferase family 1 protein
NP_192030.4
  • glycosyl transferase family 1 protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, group 1 (InterPro:IPR001296); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT5G04480.1); Has 816 Blast hits to 811 proteins in 174 species: Archae - 9; Bacteria - 331; Metazoa - 0; Fungi - 0; Plants - 66; Viruses - 0; Other Eukaryotes - 410 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003075.7 Reference assembly

    Range
    507648..512852 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_116351.7 → NP_192030.4  glycosyl transferase family 1 protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_192030.4

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178V0F5, F4JHZ4
    Conserved Domains (3) summary
    COG0438
    Location:273 → 521
    RfaB; Glycosyltransferase involved in cell wall bisynthesis [Cell wall/membrane/envelope biogenesis]
    pfam11271
    Location:898 → 966
    DUF3068; Protein of unknown function (DUF3068)
    cl10013
    Location:322 → 484
    Glycosyltransferase_GTB_type; Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate ...
Nucleotide Protein
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