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ADF8 actin depolymerizing factor 8 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 828037, updated on 18-Sep-2024

Summary

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Official Symbol
ADF8
Official Full Name
actin depolymerizing factor 8
Primary source
TAIR:AT4G00680
Locus tag
AT4G00680
See related
Araport:AT4G00680
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
actin depolymerizing factor 8; F6N23.12; F6N23_12
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Genomic context

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See ADF8 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
3
Sequence:
Chromosome: 4; NC_003075.7 (279596..281072, complement)

Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene RNAhelicase-like 8 Neighboring gene ncRNA Neighboring gene Remorin family protein Neighboring gene UB-like protease 1B Neighboring gene ncRNA Neighboring gene Spc97/Spc98 family of spindle pole body (SBP) component Neighboring gene C2 calcium/lipid-binding plant phosphoribosyltransferase family protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003075.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Actin-depolymerizing factor2-mediated actin dynamics are essential for root-knot nematode infection of Arabidopsis. Clément M, et al. Plant Cell, 2009 Sep. PMID 19794115, Free PMC Article
  2. Plant Actin-Depolymerizing Factors Possess Opposing Biochemical Properties Arising from Key Amino Acid Changes throughout Evolution. Nan Q, et al. Plant Cell, 2017 Feb. PMID 28123105, Free PMC Article
  3. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

GeneRIFs: Gene References Into Functions

General gene information

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Homology

NM_001340260.1
NM_116293.3

Gene Ontology Provided by TAIR

Process Evidence Code Pubs
acts_upstream_of_or_within actin filament depolymerization IDA
Inferred from Direct Assay
more info
 PubMed 
involved_in actin filament depolymerization IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in actin cytoskeleton IEA
Inferred from Electronic Annotation
more info
  
located_in cytoplasm ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
actin depolymerizing factor 8
NP_567182.1
  • actin depolymerizing factor 8 (ADF8); FUNCTIONS IN: actin binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; EXPRESSED IN: root, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Actin-binding, cofilin/tropomyosin type (InterPro:IPR002108); BEST Arabidopsis thaliana protein match is: actin depolymerizing factor 11 (TAIR:AT1G01750.1); Has 1612 Blast hits to 1604 proteins in 270 species: Archae - 0; Bacteria - 5; Metazoa - 759; Fungi - 157; Plants - 515; Viruses - 0; Other Eukaryotes - 176 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003075.7 Reference assembly

    Range
    279596..281072 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_116293.3 → NP_567182.1  actin depolymerizing factor 8 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_567182.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    O65277, Q570Y6, Q8LCH3
    UniProtKB/TrEMBL
    A0A178V0Z9, A0A5S9XNZ3, A0A654FKQ2
    Conserved Domains (1) summary
    cl15697
    Location:4 → 137
    ADF_gelsolin; Actin depolymerization factor/cofilin- and gelsolin-like domains

  2. NM_001340260.1 → NP_001328554.1  actin depolymerizing factor 8 [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1P8B506, A0A654FKQ2
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q570Y6.2

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