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Ankyrin repeat family protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 827906, updated on 18-Sep-2024

Summary

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Official Full Name
Ankyrin repeat family protein
Primary source
TAIR:AT4G03480
Locus tag
AT4G03480
See related
Araport:AT4G03480
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F9H3.11; F9H3_11
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Genomic context

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Location:
chromosome: 4
Exon count:
7
Sequence:
Chromosome: 4; NC_003075.7 (1545470..1548871, complement)

Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene Ankyrin repeat family protein Neighboring gene Ankyrin repeat family protein Neighboring gene Ankyrin repeat family protein Neighboring gene uncharacterized protein Neighboring gene Ankyrin repeat family protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003075.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in chloroplast ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
Ankyrin repeat family protein
NP_192257.5
  • Ankyrin repeat family protein; INVOLVED IN: biological_process unknown; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Ankyrin repeat family protein (TAIR:AT4G03440.1); Has 20363 Blast hits to 10320 proteins in 485 species: Archae - 23; Bacteria - 1523; Metazoa - 11338; Fungi - 1558; Plants - 2584; Viruses - 50; Other Eukaryotes - 3287 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003075.7 Reference assembly

    Range
    1545470..1548871 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_116586.6 → NP_192257.5  Ankyrin repeat family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_192257.5

    Status: REVIEWED

    UniProtKB/TrEMBL
    F4JG86, Q9ZT76
    Conserved Domains (5) summary
    cd00204
    Location:384 → 515
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    pfam12796
    Location:360 → 449
    Ank_2; Ankyrin repeats (3 copies)
    pfam13637
    Location:157 → 211
    Ank_4; Ankyrin repeats (many copies)
    pfam13962
    Location:588 → 659
    PGG; Domain of unknown function
    sd00045
    Location:358 → 387
    ANK; ANK repeat [structural motif]

  2. NM_001340456.1 → NP_001329132.1  Ankyrin repeat family protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1P8B6T3, Q9ZT76
Nucleotide Protein
Heading Accession and Version

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