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CRK29 cysteine-rich RLK (RECEPTOR-like protein kinase) 29 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 827893, updated on 18-Sep-2024

Summary

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Official Symbol
CRK29
Official Full Name
cysteine-rich RLK (RECEPTOR-like protein kinase) 29
Primary source
TAIR:AT4G21410
Locus tag
AT4G21410
See related
Araport:AT4G21410
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
cysteine-rich RLK (RECEPTOR-like protein kinase) 29; F18E5.30
Summary
Encodes a cysteine-rich receptor-like protein kinase.
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Genomic context

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See CRK29 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
7
Sequence:
Chromosome: 4; NC_003075.7 (11401711..11405235, complement)

Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene receptor kinase 3 Neighboring gene S-locus lectin protein kinase family protein Neighboring gene cysteine-rich RLK (RECEPTOR-like protein kinase) 28 Neighboring gene miscRNA Neighboring gene pseudo Neighboring gene protein B160

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003075.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Transcriptome analysis reveals specific modulation of abscisic acid signaling by ROP10 small GTPase in Arabidopsis. Xin Z, et al. Plant Physiol, 2005 Nov. PMID 16258012, Free PMC Article
  2. Large-scale characterization of integral proteins from Arabidopsis vacuolar membrane by two-dimensional liquid chromatography. Szponarski W, et al. Proteomics, 2004 Feb. PMID 14760709
  3. A mesoscale abscisic acid hormone interactome reveals a dynamic signaling landscape in Arabidopsis. Lumba S, et al. Dev Cell, 2014 May 12. PMID 24823379
  4. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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NM_001341488.1

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables kinase activity ISS
Inferred from Sequence or Structural Similarity
more info
  
enables protein kinase activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within response to abscisic acid IEP
Inferred from Expression Pattern
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane ISM
Inferred from Sequence Model
more info
  
located_in vacuole HDA PubMed 

General protein information

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Preferred Names
cysteine-rich RLK (RECEPTOR-like protein kinase) 29
NP_001320020.1
  • cysteine-rich RLK (RECEPTOR-like protein kinase) 29 (CRK29); FUNCTIONS IN: kinase activity; INVOLVED IN: response to abscisic acid stimulus; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Protein of unknown function DUF26 (InterPro:IPR002902), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: cysteine-rich RLK (RECEPTOR-like protein kinase) 28 (TAIR:AT4G21400.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003075.7 Reference assembly

    Range
    11401711..11405235 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_118261.4 → NP_193872.2  cysteine-rich RLK (RECEPTOR-like protein kinase) 29 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_193872.2

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    O65406, Q8S9L6
    UniProtKB/TrEMBL
    A0A178V3N0, A0A5S9XUX2, A0A654FRE6
    Conserved Domains (2) summary
    cd14066
    Location:363 → 632
    STKc_IRAK; Catalytic domain of the Serine/Threonine kinases, Interleukin-1 Receptor Associated Kinases and related STKs
    pfam01657
    Location:38 → 130
    Stress-antifung; Salt stress response/antifungal

  2. NM_001341489.1 → NP_001329810.1  cysteine-rich RLK (RECEPTOR-like protein kinase) 29 [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1P8B8X4

  3. NM_001341488.1 → NP_001320020.1  cysteine-rich RLK (RECEPTOR-like protein kinase) 29 [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178V3N0, A0A2H1ZEN4, A0A5S9XUX2
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q8S9L6.1

Gene LinkOut

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