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copper ion-binding protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 827862, updated on 18-Sep-2024

Summary

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Official Full Name
copper ion-binding protein
Primary source
TAIR:AT4G21140
Locus tag
AT4G21140
See related
Araport:AT4G21140
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F7J7.80; F7J7_80
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Genomic context

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Location:
chromosome: 4
Exon count:
1
Sequence:
Chromosome: 4; NC_003075.7 (11277185..11278318, complement)

Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene amino acid transporter 1 Neighboring gene Transducin/WD40 repeat-like superfamily protein Neighboring gene ribophorin II (RPN2) family protein Neighboring gene Calcium-dependent ARF-type GTPase activating protein family Neighboring gene Tetratricopeptide repeat (TPR)-like superfamily protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003075.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

GeneRIFs: Gene References Into Functions

General gene information

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Homology

NM_118233.5

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in chloroplast ISM
Inferred from Sequence Model
more info
  
part_of mitochondrial large ribosomal subunit IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
copper ion-binding protein
NP_193846.4
  • BEST Arabidopsis thaliana protein match is: copper ion binding (TAIR:AT4G05400.2); Has 41 Blast hits to 41 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 40; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003075.7 Reference assembly

    Range
    11277185..11278318 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_118233.5 → NP_193846.4  copper ion-binding protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_193846.4

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178UUZ5, A0A654FRQ9, F4JIM4
Nucleotide Protein
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