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Late embryogenesis abundant protein (LEA) family protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 827849, updated on 18-Sep-2024

Summary

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Official Full Name
Late embryogenesis abundant protein (LEA) family protein
Primary source
TAIR:AT4G21020
Locus tag
AT4G21020
See related
Araport:AT4G21020
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
T13K14.180; T13K14_180
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Genomic context

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Location:
chromosome: 4
Exon count:
2
Sequence:
Chromosome: 4; NC_003075.7 (11228187..11229616)

Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene alpha carbonic anhydrase 6 Neighboring gene Transcription initiation factor TFIIE, beta subunit Neighboring gene Dof-type zinc finger domain-containing protein Neighboring gene Dof-type zinc finger domain-containing protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003075.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The ubiquitous distribution of late embryogenesis abundant proteins across cell compartments in Arabidopsis offers tailored protection against abiotic stress. Candat A, et al. Plant Cell, 2014 Jul. PMID 25005920, Free PMC Article
  2. The Arabidopsis metacaspase9 degradome. Tsiatsiani L, et al. Plant Cell, 2013 Aug. PMID 23964026, Free PMC Article
  3. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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NM_118220.4

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in mitochondrion HDA PubMed 
located_in plasma membrane ISM
Inferred from Sequence Model
more info
  
located_in plastid HDA PubMed 

General protein information

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Preferred Names
Late embryogenesis abundant protein (LEA) family protein
NP_193834.1
  • Late embryogenesis abundant protein (LEA) family protein; BEST Arabidopsis thaliana protein match is: Late embryogenesis abundant protein (LEA) family protein (TAIR:AT5G44310.2); Has 25029 Blast hits to 12516 proteins in 1815 species: Archae - 109; Bacteria - 7990; Metazoa - 4935; Fungi - 1662; Plants - 2602; Viruses - 153; Other Eukaryotes - 7578 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003075.7 Reference assembly

    Range
    11228187..11229616
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_118220.4 → NP_193834.1  Late embryogenesis abundant protein (LEA) family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_193834.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A654FRA3, A0A7G2F4S5, Q9SUB2
    Conserved Domains (1) summary
    PTZ00121
    Location:78 → 261
    PTZ00121; MAEBL; Provisional
Nucleotide Protein
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