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Serine/Threonine-kinase, putative (DUF1639) [ Arabidopsis thaliana (thale cress) ]

Gene ID: 827777, updated on 18-Sep-2024

Summary

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Official Full Name
Serine/Threonine-kinase, putative (DUF1639)
Primary source
TAIR:AT4G20300
Locus tag
AT4G20300
See related
Araport:AT4G20300
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F1C12.211; F1C12_211
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Genomic context

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Location:
chromosome: 4
Exon count:
5
Sequence:
Chromosome: 4; NC_003075.7 (10955311..10959239)

Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene Leucine-rich receptor-like protein kinase family protein Neighboring gene TBP-associated factor 11 Neighboring gene uncharacterized protein Neighboring gene Peptidase M50 family protein Neighboring gene CTP synthase family protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003075.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Extensive signal integration by the phytohormone protein network. Altmann M, et al. Nature, 2020 Jul. PMID 32612234
  2. Evidence for network evolution in an Arabidopsis interactome map. Arabidopsis Interactome Mapping Consortium. Science, 2011 Jul 29. PMID 21798944, Free PMC Article
  3. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

NM_118149.4
NM_179082.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables protein binding IPI
Inferred from Physical Interaction
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
Serine/Threonine-kinase, putative (DUF1639)
NP_567597.2
  • Protein of unknown function (DUF1639); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1639 (InterPro:IPR012438); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1639) (TAIR:AT1G55340.1); Has 598 Blast hits to 583 proteins in 86 species: Archae - 0; Bacteria - 10; Metazoa - 190; Fungi - 42; Plants - 277; Viruses - 0; Other Eukaryotes - 79 (source: NCBI BLink).
NP_849413.1
  • Protein of unknown function (DUF1639); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1639 (InterPro:IPR012438); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1639) (TAIR:AT1G55340.1); Has 587 Blast hits to 572 proteins in 85 species: Archae - 0; Bacteria - 8; Metazoa - 183; Fungi - 42; Plants - 277; Viruses - 0; Other Eukaryotes - 77 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003075.7 Reference assembly

    Range
    10955311..10959239
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_118149.4 → NP_567597.2  Serine/Threonine-kinase, putative (DUF1639) [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_567597.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A654FRB6, Q8L603
    Conserved Domains (1) summary
    pfam07797
    Location:275 → 324
    DUF1639; Protein of unknown function (DUF1639)

  2. NM_179082.3 → NP_849413.1  Serine/Threonine-kinase, putative (DUF1639) [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_849413.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A654FRB6, F4JUU4
    Conserved Domains (1) summary
    pfam07797
    Location:275 → 324
    DUF1639; Protein of unknown function (DUF1639)
Nucleotide Protein
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