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Glutathione S-transferase family protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 827734, updated on 18-Sep-2024

Summary

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Official Full Name
Glutathione S-transferase family protein
Primary source
TAIR:AT4G19880
Locus tag
AT4G19880
See related
Araport:AT4G19880
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
T16H5.240; T16H5_240
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Genomic context

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Location:
chromosome: 4
Exon count:
6
Sequence:
Chromosome: 4; NC_003075.7 (10784347..10786556, complement)

Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene Galactose oxidase/kelch repeat superfamily protein Neighboring gene Galactose oxidase/kelch repeat superfamily protein Neighboring gene Pentatricopeptide repeat (PPR-like) superfamily protein Neighboring gene alpha 1,4-glycosyltransferase family protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003075.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Integrative Analysis from the Epigenome to Translatome Uncovers Patterns of Dominant Nuclear Regulation during Transient Stress. Lee TA, et al. Plant Cell, 2019 Nov. PMID 31519798, Free PMC Article
  2. A proteomic strategy for global analysis of plant protein complexes. Aryal UK, et al. Plant Cell, 2014 Oct. PMID 25293756, Free PMC Article
  3. Global Analysis of Membrane-associated Protein Oligomerization Using Protein Correlation Profiling. McBride Z, et al. Mol Cell Proteomics, 2017 Nov. PMID 28887381, Free PMC Article
  4. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

GeneRIFs: Gene References Into Functions

General gene information

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NM_001036594.1
NM_001036595.2
NM_118108.8

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables glutathione transferase activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within cellular response to hypoxia HEP PubMed 
Component Evidence Code Pubs
located_in chloroplast HDA PubMed 
located_in chloroplast ISM
Inferred from Sequence Model
more info
  
located_in cytosol HDA PubMed 

General protein information

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Preferred Names
Glutathione S-transferase family protein
NP_001031671.1
  • Glutathione S-transferase family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to cadmium ion; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glutathione S-transferase, predicted (InterPro:IPR016639), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Glutathione S-transferase family protein (TAIR:AT5G45020.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
NP_001031672.1
  • Glutathione S-transferase family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to cadmium ion; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glutathione S-transferase, predicted (InterPro:IPR016639), Glutathione S-transferase, C-terminal (InterPro:IPR004046), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Glutathione S-transferase family protein (TAIR:AT5G45020.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
NP_193723.3
  • Glutathione S-transferase family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to cadmium ion; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glutathione S-transferase, predicted (InterPro:IPR016639), Glutathione S-transferase, C-terminal (InterPro:IPR004046), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Glutathione S-transferase family protein (TAIR:AT5G45020.2); Has 2453 Blast hits to 2453 proteins in 809 species: Archae - 30; Bacteria - 1521; Metazoa - 25; Fungi - 239; Plants - 128; Viruses - 0; Other Eukaryotes - 510 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003075.7 Reference assembly

    Range
    10784347..10786556 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_118108.8 → NP_193723.3  Glutathione S-transferase family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_193723.3

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A654FR14, Q8H121
    Conserved Domains (1) summary
    COG0435
    Location:35 → 355
    ECM4; Glutathionyl-hydroquinone reductase [Energy production and conversion]

  2. NM_001036595.2 → NP_001031672.1  Glutathione S-transferase family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_001031672.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    F4JU04
    Conserved Domains (2) summary
    pfam13409
    Location:83 → 185
    GST_N_2; Glutathione S-transferase, N-terminal domain
    cl02776
    Location:200 → 280
    GST_C_family; C-terminal, alpha helical domain of the Glutathione S-transferase family

  3. NM_001036594.1 → NP_001031671.1  Glutathione S-transferase family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_001031671.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A5S9XUX5, F4JU03
    Conserved Domains (3) summary
    cd03190
    Location:200 → 367
    GST_C_Omega_like; C-terminal, alpha helical domain of Class Omega-like Glutathione S-transferases
    COG0435
    Location:35 → 381
    ECM4; Glutathionyl-hydroquinone reductase [Energy production and conversion]
    pfam13409
    Location:83 → 185
    GST_N_2; Glutathione S-transferase, N-terminal domain
Nucleotide Protein
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