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alpha/beta-Hydrolases superfamily protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 827730, updated on 18-Sep-2024

Summary

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Official Full Name
alpha/beta-Hydrolases superfamily protein
Primary source
TAIR:AT4G19860
Locus tag
AT4G19860
See related
Araport:AT4G19860
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
T16H5.220; T16H5_220
Summary
Encodes a cytosolic calcium-independent phospholipase A.
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Genomic context

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Location:
chromosome: 4
Exon count:
11
Sequence:
Chromosome: 4; NC_003075.7 (10777512..10780470, complement)

Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene Glycosyl hydrolase family protein with chitinase insertion domain-containing protein Neighboring gene FKBP-like peptidyl-prolyl cis-trans isomerase family protein Neighboring gene phloem protein 2-A1 Neighboring gene lectin-like protein Neighboring gene Galactose oxidase/kelch repeat superfamily protein Neighboring gene Galactose oxidase/kelch repeat superfamily protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003075.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Identification and characterization of an LCAT-like Arabidopsis thaliana gene encoding a novel phospholipase A. Chen G, et al. FEBS Lett, 2012 Feb 17. PMID 22245677
  2. Cloning and functional characterization of a phospholipid:diacylglycerol acyltransferase from Arabidopsis. Ståhl U, et al. Plant Physiol, 2004 Jul. PMID 15247387, Free PMC Article
  3. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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NM_118106.4

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables O-acyltransferase activity IEA
Inferred from Electronic Annotation
more info
  
enables phospholipase activity IDA
Inferred from Direct Assay
more info
 PubMed 
Process Evidence Code Pubs
acts_upstream_of_or_within phospholipid catabolic process IDA
Inferred from Direct Assay
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IDA
Inferred from Direct Assay
more info
 PubMed 

General protein information

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Preferred Names
alpha/beta-Hydrolases superfamily protein
NP_193721.2
  • alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: phosphatidylcholine-sterol O-acyltransferase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Lecithin:cholesterol acyltransferase (InterPro:IPR003386); BEST Arabidopsis thaliana protein match is: lecithin:cholesterol acyltransferase 3 (TAIR:AT3G03310.1); Has 596 Blast hits to 589 proteins in 168 species: Archae - 2; Bacteria - 89; Metazoa - 166; Fungi - 41; Plants - 181; Viruses - 0; Other Eukaryotes - 117 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003075.7 Reference assembly

    Range
    10777512..10780470 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_118106.4 → NP_193721.2  alpha/beta-Hydrolases superfamily protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_193721.2

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    O81867, Q71N54
    UniProtKB/TrEMBL
    A0A5S9XU30
    Conserved Domains (1) summary
    PLN02733
    Location:13 → 454
    PLN02733; phosphatidylcholine-sterol O-acyltransferase
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q71N54.1

Gene LinkOut

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