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NRAMP5 NRAMP metal ion transporter family protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 827613, updated on 18-Sep-2024

Summary

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Official Symbol
NRAMP5
Official Full Name
NRAMP metal ion transporter family protein
Primary source
TAIR:AT4G18790
Locus tag
AT4G18790
See related
Araport:AT4G18790
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
ATNRAMP5; F28A21.200; F28A21_200
Summary
member of Nramp2 family
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Genomic context

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See NRAMP5 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
4
Sequence:
Chromosome: 4; NC_003075.7 (10317416..10319736, complement)

Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene myb domain protein 98 Neighboring gene cellulose synthase family protein Neighboring gene ncRNA Neighboring gene RAB GTPase homolog A1D Neighboring gene NAD(P)-binding Rossmann-fold superfamily protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003075.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Phylogenetic relationships within cation transporter families of Arabidopsis. Mäser P, et al. Plant Physiol, 2001 Aug. PMID 11500563, Free PMC Article
  2. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

GeneRIFs: Gene References Into Functions

General gene information

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NM_117995.2

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables inorganic anion transmembrane transporter activity ISS
Inferred from Sequence or Structural Similarity
more info
  
enables metal ion transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
  
enables metal ion transmembrane transporter activity NAS
Non-traceable Author Statement
more info
 PubMed 
Process Evidence Code Pubs
acts_upstream_of_or_within intracellular monoatomic cation homeostasis NAS
Non-traceable Author Statement
more info
 PubMed 
acts_upstream_of_or_within metal ion transport NAS
Non-traceable Author Statement
more info
 PubMed 
acts_upstream_of_or_within monoatomic cation transmembrane transport NAS
Non-traceable Author Statement
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
NRAMP metal ion transporter family protein
NP_193614.1
  • NRAMP5; FUNCTIONS IN: inorganic anion transmembrane transporter activity, metal ion transmembrane transporter activity; INVOLVED IN: cellular metal ion homeostasis, metal ion transport; LOCATED IN: membrane; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Natural resistance-associated macrophage protein (InterPro:IPR001046); BEST Arabidopsis thaliana protein match is: NRAMP metal ion transporter 2 (TAIR:AT1G47240.1); Has 5000 Blast hits to 4958 proteins in 1554 species: Archae - 111; Bacteria - 3609; Metazoa - 367; Fungi - 258; Plants - 341; Viruses - 0; Other Eukaryotes - 314 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003075.7 Reference assembly

    Range
    10317416..10319736 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_117995.2 → NP_193614.1  NRAMP metal ion transporter family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_193614.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9SN36
    UniProtKB/TrEMBL
    A0A178UT45, A0A654FQQ4
    Conserved Domains (2) summary
    pfam01566
    Location:90 → 453
    Nramp; Natural resistance-associated macrophage protein
    cl00456
    Location:68 → 446
    SLC5-6-like_sbd; Solute carrier families 5 and 6-like; solute binding domain
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9SN36.1

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