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suppressor [ Arabidopsis thaliana (thale cress) ]

Gene ID: 827532, updated on 18-Sep-2024

Summary

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Official Full Name
suppressor
Primary source
TAIR:AT4G18070
Locus tag
AT4G18070
See related
Araport:AT4G18070
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F15J5.40; F15J5_40
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Genomic context

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Location:
chromosome: 4
Exon count:
5
Sequence:
Chromosome: 4; NC_003075.7 (10030529..10033044)

Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene eukaryotic translation initiation factor 4E Neighboring gene P-glycoprotein 9 Neighboring gene SH3 domain-containing protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003075.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Global Analysis of Membrane-associated Protein Oligomerization Using Protein Correlation Profiling. McBride Z, et al. Mol Cell Proteomics, 2017 Nov. PMID 28887381, Free PMC Article
  2. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

GeneRIFs: Gene References Into Functions

General gene information

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NM_001036582.5
NM_001036583.3
NM_001341258.1
NM_001341259.1
NM_001341260.1
NM_117917.4
NM_179074.5

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in cytosol HDA PubMed 
located_in nucleus ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
suppressor
NP_001031659.2
  • unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G29530.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
NP_001031660.2
  • unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G29530.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
NP_567549.2
  • unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G29530.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
NP_849405.2
  • unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G29530.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003075.7 Reference assembly

    Range
    10030529..10033044
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_117917.4 → NP_567549.2  suppressor [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_567549.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178V2D9, A0A384KG92, F4JQQ8, Q8L9U4

  2. NM_179074.5 → NP_849405.2  suppressor [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_849405.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178V330, A0A7G2EYD8, Q8VZS7, Q9SVW4

  3. NM_001036583.3 → NP_001031660.2  suppressor [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_001031660.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178V330, A0A7G2EYD8, Q8VZS7, Q9SVW4

  4. NM_001036582.5 → NP_001031659.2  suppressor [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_001031659.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178V330, A0A7G2EYD8, Q8VZS7, Q9SVW4

  5. NM_001341259.1 → NP_001329128.1  suppressor [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178V2D9, A0A384KG92, F4JQQ8, Q8L9U4

  6. NM_001341258.1 → NP_001329127.1  suppressor [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178V2D9, A0A384KG92, F4JQQ8, Q8L9U4

  7. NM_001341260.1 → NP_001329129.1  suppressor [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178V2D9, A0A384KG92, F4JQQ8, Q8L9U4
Nucleotide Protein
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