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LOC8275217 probable CoA ligase CCL7 [ Ricinus communis (castor bean) ]

Gene ID: 8275217, updated on 30-Nov-2023

Summary

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Gene symbol
LOC8275217
Gene description
probable CoA ligase CCL7
Locus tag
RCOM_0473330
Gene type
protein coding
RefSeq status
MODEL
Organism
Ricinus communis
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Acalyphoideae; Acalypheae; Ricinus
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Genomic context

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See LOC8275217 in Genome Data Viewer
Location:
chromosome: 8
Exon count:
6
Annotation release Status Assembly Chr Location
102 current ASM1957865v1 (GCF_019578655.1) 8 NC_063263.1 (15510035..15514426)
101 previous assembly JCVI_RCG_1.1 (GCF_000151685.1) Unplaced Scaffold NW_002994426.1 (118739..123541, complement)

Chromosome 8 - NC_063263.1Genomic Context describing neighboring genes Neighboring gene transcription factor RAX2 Neighboring gene lactoylglutathione lyase Neighboring gene uncharacterized LOC112535558 Neighboring gene heavy metal-associated isoprenylated plant protein 3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables CoA-ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable CoA ligase CCL7
Names
4-coumarate--CoA ligase-like 7

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ricinus communis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1957865v1

Genomic

  1. NC_063263.1 Reference ASM1957865v1

    Range
    15510035..15514426
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002523652.4 → XP_002523698.1  probable CoA ligase CCL7

    See identical proteins and their annotated locations for XP_002523698.1

    UniProtKB/TrEMBL
    B9SCH9
    Conserved Domains (2) summary
    cd05904
    Location:21 → 534
    4CL; 4-Coumarate-CoA Ligase (4CL)
    PLN02246
    Location:11 → 538
    PLN02246; 4-coumarate--CoA ligase
Nucleotide Protein
Heading Accession and Version

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