U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

G2484-1 G2484-1 protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 827445, updated on 18-Sep-2024

Summary

Go to the top of the page Help
Official Symbol
G2484-1
Official Full Name
G2484-1 protein
Primary source
TAIR:AT4G17330
Locus tag
AT4G17330
See related
Araport:AT4G17330
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
ATG2484-1; DL4700C; FCAALL.411; G2484-1 protein
Summary
gene of unknown function expressed in seedlings, flower buds and stems
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See G2484-1 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
17
Sequence:
Chromosome: 4; NC_003075.7 (9688851..9697706, complement)

Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene Class II aminoacyl-tRNA and biotin synthetases superfamily protein Neighboring gene uncharacterized protein Neighboring gene tonoplast intrinsic protein 2;2 Neighboring gene auxin canalization protein (DUF828) Neighboring gene Formyl transferase

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_003075.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. SWO1 modulates cell wall integrity under salt stress by interacting with importin ɑ in Arabidopsis. Wang Z, et al. Stress Biol, 2021 Sep 29. PMID 37676567, Free PMC Article
  2. Post-transcriptional control of GRF transcription factors by microRNA miR396 and GIF co-activator affects leaf size and longevity. Debernardi JM, et al. Plant J, 2014 Aug. PMID 24888433
  3. bHLH05 is an interaction partner of MYB51 and a novel regulator of glucosinolate biosynthesis in Arabidopsis. Frerigmann H, et al. Plant Physiol, 2014 Sep. PMID 25049362, Free PMC Article
  4. Proteome-wide screens for small ubiquitin-like modifier (SUMO) substrates identify Arabidopsis proteins implicated in diverse biological processes. Elrouby N, et al. Proc Natl Acad Sci U S A, 2010 Oct 5. PMID 20855607, Free PMC Article
  5. Mapping the signaling network of BIN2 kinase using TurboID-mediated biotin labeling and phosphoproteomics. Kim TW, et al. Plant Cell, 2023 Mar 15. PMID 36660928, Free PMC Article

See all (7) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

Go to the top of the page Help
Products Interactant Other Gene Complex Source Pubs Description

General gene information

Go to the top of the page Help
NM_001341214.1
NM_001341215.1
NM_117837.7

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables protein binding IPI
Inferred from Physical Interaction
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IDA
Inferred from Direct Assay
more info
 PubMed 
located_in nucleus ISM
Inferred from Sequence Model
more info
  
located_in plasmodesma HDA PubMed 

General protein information

Go to the top of the page Help
Preferred Names
G2484-1 protein
NP_193464.5
  • G2484-1 protein (G2484-1); FUNCTIONS IN: RNA binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Agenet (InterPro:IPR008395), Tudor-like, plant (InterPro:IPR014002); BEST Arabidopsis thaliana protein match is: agenet domain-containing protein / bromo-adjacent homology (BAH) domain-containing protein (TAIR:AT1G68580.2); Has 6169 Blast hits to 4010 proteins in 631 species: Archae - 30; Bacteria - 1624; Metazoa - 1931; Fungi - 976; Plants - 400; Viruses - 26; Other Eukaryotes - 1182 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003075.7 Reference assembly

    Range
    9688851..9697706 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_117837.7 → NP_193464.5  G2484-1 protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_193464.5

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A654FQC1, F4JP43
    Conserved Domains (2) summary
    smart00743
    Location:1662 → 1720
    Agenet; Tudor-like domain present in plant sequences
    pfam05641
    Location:1576 → 1640
    Agenet; Agenet domain

  2. NM_001341214.1 → NP_001329269.1  G2484-1 protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A654FQC1, F4JP43

  3. NM_001341215.1 → NP_001329268.1  G2484-1 protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1P8B770, A0A654FQC1
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.