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RABB1a RAB GTPase homolog B1A [ Arabidopsis thaliana (thale cress) ]

Gene ID: 827427, updated on 18-Sep-2024

Summary

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Official Symbol
RABB1a
Official Full Name
RAB GTPase homolog B1A
Primary source
TAIR:AT4G17160
Locus tag
AT4G17160
See related
Araport:AT4G17160
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
ATRAB2B; ATRABB1A; DL4615C; FCAALL.364; RAB GTPase homolog B1A
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Genomic context

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See RABB1a in Genome Data Viewer
Location:
chromosome: 4
Exon count:
5
Sequence:
Chromosome: 4; NC_003075.7 (9641859..9643738, complement)

Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene poly(U)-specific endoribonuclease-B protein Neighboring gene pleckstrin homology (PH) domain-containing protein Neighboring gene alpha/beta-Hydrolases superfamily protein Neighboring gene ncRNA Neighboring gene RAB GTPase homolog B1C

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003075.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. CHARACTERIZATION OF A RABE (RAS GENE FROM RAT BRAIN E) GTPASE EXPRESSED DURING MORPHOGENESIS IN THE UNICELLULAR GREEN ALGA MICRASTERIAS DENTICULATA (ZYGNEMATOPHYCEAE, STREPTOPHYTA)(1). Vannerum K, et al. J Phycol, 2012 Jun. PMID 27011085
  2. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

GeneRIFs: Gene References Into Functions

General gene information

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NM_117820.2

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables GTPase activity IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
RAB GTPase homolog B1A
NP_193449.1
  • RAB GTPase homolog B1A (RABB1a); FUNCTIONS IN: GTP binding; INVOLVED IN: protein transport, small GTPase mediated signal transduction; CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806), Small GTP-binding protein (InterPro:IPR005225), Small GTPase (InterPro:IPR020851), Ras (InterPro:IPR013753), Ras small GTPase, Rab type (InterPro:IPR003579); BEST Arabidopsis thaliana protein match is: RAB GTPase homolog B1C (TAIR:AT4G17170.1); Has 26911 Blast hits to 26856 proteins in 734 species: Archae - 13; Bacteria - 137; Metazoa - 14009; Fungi - 4103; Plants - 2888; Viruses - 20; Other Eukaryotes - 5741 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003075.7 Reference assembly

    Range
    9641859..9643738 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_117820.2 → NP_193449.1  RAB GTPase homolog B1A [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_193449.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    O23561
    UniProtKB/TrEMBL
    A0A178UXW9, A0A7G2F081
    Conserved Domains (1) summary
    PLN03108
    Location:1 → 204
    PLN03108; Rab family protein; Provisional
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
O23561.1

Gene LinkOut

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