ATP-dependent caseinolytic (Clp) protease/crotonase family protein [Arabidopsis thaliana (thale cress)] - Gene

Summary

Official Full Name: ATP-dependent caseinolytic (Clp) protease/crotonase family protein
Primary source: TAIR:AT4G16800
Locus tag: AT4G16800
See related: Araport:AT4G16800
Gene type: protein coding
RefSeq status: REVIEWED
Organism: Arabidopsis thaliana (ecotype: Columbia)
Lineage: Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as: DL4425C; FCAALL.21
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Chromosome 4 - NC_003075.7 Genomic Context describing neighboring genes

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NM_117782.4

Function	Evidence Code	Pubs
enables enoyl-CoA hydratase activity	IEA Inferred from Electronic Annotation more info
enables methylglutaconyl-CoA hydratase activity	IDA Inferred from Direct Assay more info	PubMed
enables methylglutaconyl-CoA hydratase activity	IMP Inferred from Mutant Phenotype more info	PubMed

Process	Evidence Code	Pubs
acts_upstream_of_or_within branched-chain amino acid catabolic process	IMP Inferred from Mutant Phenotype more info	PubMed
involved_in fatty acid beta-oxidation	IEA Inferred from Electronic Annotation more info

Component	Evidence Code	Pubs
located_in cytosol	HDA more info	PubMed
located_in mitochondrion	IDA Inferred from Direct Assay more info	PubMed
located_in mitochondrion	ISM Inferred from Sequence Model more info

Preferred Names: ATP-dependent caseinolytic (Clp) protease/crotonase family protein

NP_193413.2

ATP-dependent caseinolytic (Clp) protease/crotonase family protein; FUNCTIONS IN: enoyl-CoA hydratase activity, catalytic activity; INVOLVED IN: fatty acid metabolic process, metabolic process; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Enoyl-CoA hydratase/isomerase, conserved site (InterPro:IPR018376), Crotonase, core (InterPro:IPR001753); BEST Arabidopsis thaliana protein match is: delta(3,5),delta(2,4)-dienoyl-CoA isomerase 1 (TAIR:AT5G43280.1); Has 38027 Blast hits to 38009 proteins in 2336 species: Archae - 484; Bacteria - 24986; Metazoa - 1599; Fungi - 771; Plants - 617; Viruses - 0; Other Eukaryotes - 9570 (source: NCBI BLink).

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The following sections contain reference sequences that belong to a specific genome build. Explain