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CBL6 calcineurin B-like protein 6 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 827330, updated on 18-Sep-2024

Summary

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Official Symbol
CBL6
Official Full Name
calcineurin B-like protein 6
Primary source
TAIR:AT4G16350
Locus tag
AT4G16350
See related
Araport:AT4G16350
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
calcineurin B-like protein 6; DL4205C; FCAALL.89; SCABP2; SOS3-LIKE CALCIUM BINDING PROTEIN 2
Summary
Calcium sensor protein. Binds CIPK14.
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Genomic context

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See CBL6 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
8
Sequence:
Chromosome: 4; NC_003075.7 (9242274..9243912, complement)

Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene LSD1-like 3 Neighboring gene 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein Neighboring gene guanyl-nucleotide exchange factors;GTPase binding;GTP binding protein Neighboring gene ncRNA Neighboring gene SNF1-related protein kinase regulatory subunit beta-2

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003075.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. N-terminal S-acylation facilitates tonoplast targeting of the calcium sensor CBL6. Zhang C, et al. FEBS Lett, 2017 Nov. PMID 29023681
  2. Calcineurin B-like 3 calcium sensor associates with and inhibits 5'-methylthioadenosine nucleosidase 2 in Arabidopsis. Ok SH, et al. Plant Sci, 2015 Sep. PMID 26259190
  3. A protein kinase, calcineurin B-like protein-interacting protein Kinase9, interacts with calcium sensor calcineurin B-like Protein3 and regulates potassium homeostasis under low-potassium stress in Arabidopsis. Liu LL, et al. Plant Physiol, 2013 Jan. PMID 23109687, Free PMC Article
  4. The NAF domain defines a novel protein-protein interaction module conserved in Ca2+-regulated kinases. Albrecht V, et al. EMBO J, 2001 Mar 1. PMID 11230129, Free PMC Article
  5. Global Analysis of Membrane-associated Protein Oligomerization Using Protein Correlation Profiling. McBride Z, et al. Mol Cell Proteomics, 2017 Nov. PMID 28887381, Free PMC Article

See all (6) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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NM_117730.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables calcium ion binding ISS
Inferred from Sequence or Structural Similarity
more info
 PubMed 
enables kinase binding IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within calcium-mediated signaling ISS
Inferred from Sequence or Structural Similarity
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol HDA PubMed 
located_in intracellular anatomical structure ISS
Inferred from Sequence or Structural Similarity
more info
 PubMed 
located_in mitochondrion ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
calcineurin B-like protein 6
NP_567492.1
  • calcineurin B-like protein 6 (CBL6); FUNCTIONS IN: calcium ion binding; INVOLVED IN: calcium-mediated signaling; LOCATED IN: endomembrane system; EXPRESSED IN: sepal, male gametophyte, root, carpel, stamen; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Recoverin (InterPro:IPR001125), EF-HAND 2 (InterPro:IPR018249), Calcineurin B protein (InterPro:IPR015757), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048); BEST Arabidopsis thaliana protein match is: calcineurin B-like 3 (TAIR:AT4G26570.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003075.7 Reference assembly

    Range
    9242274..9243912 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001341098.1 → NP_001328805.1  calcineurin B-like protein 6 [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    O23480, Q9C5P6, Q9FVF2
    UniProtKB/TrEMBL
    A0A178V1R7, A0A654FPX1
    Conserved Domains (1) summary
    COG5126
    Location:38 → 192
    FRQ1; Ca2+-binding protein, EF-hand superfamily [Signal transduction mechanisms]

  2. NM_117730.3 → NP_567492.1  calcineurin B-like protein 6 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_567492.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    O23480, Q9C5P6, Q9FVF2
    UniProtKB/TrEMBL
    A0A178V1R7, A0A654FPX1
    Conserved Domains (1) summary
    COG5126
    Location:38 → 192
    FRQ1; Ca2+-binding protein, EF-hand superfamily [Signal transduction mechanisms]
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9C5P6.2

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