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Calcium-dependent lipid-binding (CaLB domain) family protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 827252, updated on 18-Sep-2024

Summary

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Official Full Name
Calcium-dependent lipid-binding (CaLB domain) family protein
Primary source
TAIR:AT4G15740
Locus tag
AT4G15740
See related
Araport:AT4G15740
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
DL3910C; FCAALL.373
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Genomic context

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Location:
chromosome: 4
Exon count:
1
Sequence:
Chromosome: 4; NC_003075.7 (8964683..8966351, complement)

Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene SCR-like 11 Neighboring gene SCR-like 10 Neighboring gene Plant invertase/pectin methylesterase inhibitor superfamily protein Neighboring gene Calcium-dependent lipid-binding (CaLB domain) family protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003075.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

GeneRIFs: Gene References Into Functions

General gene information

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NM_117665.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in defense response IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  

General protein information

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Preferred Names
Calcium-dependent lipid-binding (CaLB domain) family protein
NP_193309.1
  • Calcium-dependent lipid-binding (CaLB domain) family protein; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: Calcium-dependent lipid-binding (CaLB domain) family protein (TAIR:AT3G16510.1); Has 658 Blast hits to 447 proteins in 69 species: Archae - 0; Bacteria - 0; Metazoa - 39; Fungi - 33; Plants - 570; Viruses - 0; Other Eukaryotes - 16 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003075.7 Reference assembly

    Range
    8964683..8966351 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_117665.3 → NP_193309.1  Calcium-dependent lipid-binding (CaLB domain) family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_193309.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178UYA5, O23425
    Conserved Domains (1) summary
    cd04051
    Location:231 → 366
    C2_SRC2_like; C2 domain present in Soybean genes Regulated by Cold 2 (SRC2)-like proteins
Nucleotide Protein
Heading Accession and Version

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