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ATCSLB05 Cellulose synthase family protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 827195, updated on 18-Sep-2024

Summary

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Official Symbol
ATCSLB05
Official Full Name
Cellulose synthase family protein
Primary source
TAIR:AT4G15290
Locus tag
AT4G15290
See related
Araport:AT4G15290
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
ATCSLB5; CELLULOSE SYNTHASE LIKE 5; CSLB05; DL3690C; FCAALL.256
Summary
Encodes a gene similar to cellulose synthase. Mutants exhibit shorter root hairs under phosphate-deficient conditions.
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Genomic context

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See ATCSLB05 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
9
Sequence:
Chromosome: 4; NC_003075.7 (8721482..8726733, complement)

Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene glucosyltransferase-like protein Neighboring gene UDP-glucosyl transferase 71B5 Neighboring gene cytochrome P450, family 702, subfamily A, polypeptide 2 Neighboring gene cytochrome P450, family 702, subfamily A, polypeptide 3

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003075.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Coexpression-based clustering of Arabidopsis root genes predicts functional modules in early phosphate deficiency signaling. Lin WD, et al. Plant Physiol, 2011 Mar. PMID 21248074, Free PMC Article
  2. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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NM_117617.6

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables cellulose synthase (UDP-forming) activity IEA
Inferred from Electronic Annotation
more info
  
enables cellulose synthase activity ISS
Inferred from Sequence or Structural Similarity
more info
  
enables glycosyltransferase activity ISS
Inferred from Sequence or Structural Similarity
more info
  
Process Evidence Code Pubs
involved_in cellulose biosynthetic process IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within root hair elongation IMP
Inferred from Mutant Phenotype
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
Cellulose synthase family protein
NP_193264.3
  • ATCSLB05; FUNCTIONS IN: cellulose synthase activity, transferase activity, transferring glycosyl groups, transferase activity; INVOLVED IN: cellulose biosynthetic process, polysaccharide biosynthetic process; LOCATED IN: membrane; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Cellulose synthase (InterPro:IPR005150); BEST Arabidopsis thaliana protein match is: cellulose synthase-like B3 (TAIR:AT2G32530.1); Has 2274 Blast hits to 2142 proteins in 418 species: Archae - 1; Bacteria - 625; Metazoa - 0; Fungi - 5; Plants - 1626; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003075.7 Reference assembly

    Range
    8721482..8726733 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_117617.6 → NP_193264.3  Cellulose synthase family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_193264.3

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    O23383, Q0WT40, Q7XA79
    UniProtKB/TrEMBL
    A0A654FPK8, W8Q2Z8
    Conserved Domains (2) summary
    PLN02190
    Location:1 → 755
    PLN02190; cellulose synthase-like protein
    cl11394
    Location:253 → 510
    Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q0WT40.2

Gene LinkOut

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